Detailed information of alvinactis_v1_g18424 in Alvinactis idsseensis sp. Nov.

Genomic Location: chr_9:12818123...12819793
NR annotation: XP_028512811.1, circadian locomoter output cycles protein kaput [Exaiptasia diaphana]


 Gene Structure
More details in Jbrowse  Sequence
CDS
Transcript
Protein
 Uniprot
Uniprot termDescription
O15516Circadian locomoter output cycles protein kaput OS=Homo sapiens OX=9606 GN=CLOCK PE=1 SV=1
Q5RAK8Circadian locomoter output cycles protein kaput OS=Pongo abelii OX=9601 GN=CLOCK PE=2 SV=1
Q91YA8Circadian locomoter output cycles protein kaput OS=Spalax judaei OX=134510 GN=Clock PE=2 SV=1
 Gene family
Gene familySubfamily
Transcription Factors FamilybHLH

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF00010HLHHelix-loop-helix DNA-binding domainDomainInterproscan
PF08447PAS_3PAS foldDomainInterproscan
PF00989PASPAS foldDomainInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR000014DomainPAS domainInterproscan
IPR011598DomainMyc-type, basic helix-loop-helix (bHLH) domainInterproscan
IPR013655DomainPAS fold-3Interproscan
IPR013767DomainPAS foldInterproscan
IPR036638Homologous_superfamilyHelix-loop-helix DNA-binding domain superfamilyInterproscan
IPR047230FamilyCircadian locomoter output cycles protein kaput-likeInterproscan
IPR035965Homologous_superfamilyPAS domain superfamilyInterproscan
IPR001067FamilyNuclear translocatorInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR46055CIRCADIAN LOCOMOTER OUTPUT CYCLES PROTEIN KAPUTInterproscan

 Gene Ontology
GO termsCategoryDescriptionSource
GO:0046983Molecular Functionprotein dimerization activityInterproscan
GO:0005515Molecular Functionprotein bindingInterproscan
GO:0006355Biological Processregulation of DNA-templated transcriptionInterproscan
GO:0000978Molecular FunctionRNA polymerase II cis-regulatory region sequence-specific DNA bindingInterproscan
GO:0000981Molecular FunctionDNA-binding transcription factor activity, RNA polymerase II-specificInterproscan
GO:0006357Biological Processregulation of transcription by RNA polymerase IIInterproscan
GO:0032922Biological Processcircadian regulation of gene expressionInterproscan
GO:1990513Cellular ComponentCLOCK-BMAL transcription complexInterproscan
GO:0003700Molecular FunctionDNA-binding transcription factor activityInterproscan
GO:0005634Cellular ComponentnucleusInterproscan
GO:0005667Cellular Componenttranscription regulator complexInterproscan
GO:0005737Cellular ComponentcytoplasmInterproscan

 KEGG pathway
KOEnzymeEnzyme IDpathwaymapIDSource
K02223CLOCK, KAT13D; circadian locomoter output cycles kaput proteinEC:2.3.1.48
Chromosome and associated proteinsko03036deepkoala

TOP