Detailed information of alvinactis_v1_g18845 in Alvinactis idsseensis sp. Nov.

Genomic Location: chr_9:22120799...22127889
NR annotation: XP_020903810.1, E3 ubiquitin-protein ligase TRIM71 [Exaiptasia diaphana]


 Gene Structure
More details in Jbrowse  Sequence
CDS
Transcript
Protein
 Uniprot
Uniprot termDescription
E7FAM5E3 ubiquitin-protein ligase TRIM71 OS=Danio rerio OX=7955 GN=trim71 PE=1 SV=1
D3ZVM4E3 ubiquitin-protein ligase TRIM71 OS=Rattus norvegicus OX=10116 GN=Trim71 PE=3 SV=1
Q1PSW8E3 ubiquitin-protein ligase TRIM71 OS=Mus musculus OX=10090 GN=Trim71 PE=1 SV=1

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF01436NHLNHL repeatRepeatInterproscan
PF00630FilaminFilamin/ABP280 repeatDomainInterproscan
PF00097zf-C3HC4Zinc finger, C3HC4 type (RING finger)DomainInterproscan
PF00643zf-B_boxB-box zinc fingerDomainInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR011042Homologous_superfamilySix-bladed beta-propeller, TolB-likeInterproscan
IPR001258RepeatNHL repeatInterproscan
IPR017868RepeatFilamin/ABP280 repeat-likeInterproscan
IPR017907Conserved_siteZinc finger, RING-type, conserved siteInterproscan
IPR001841DomainZinc finger, RING-typeInterproscan
IPR000315DomainB-box-type zinc fingerInterproscan
IPR018957DomainZinc finger, C3HC4 RING-typeInterproscan
IPR001298RepeatFilamin/ABP280 repeatInterproscan
IPR047153FamilyTRIM45/56/19Interproscan
IPR013083Homologous_superfamilyZinc finger, RING/FYVE/PHD-typeInterproscan
IPR013783Homologous_superfamilyImmunoglobulin-like foldInterproscan
IPR014756Homologous_superfamilyImmunoglobulin E-setInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR25462BONUS, ISOFORM C-RELATEDInterproscan

 Gene Ontology
GO termsCategoryDescriptionSource
GO:0005515Molecular Functionprotein bindingInterproscan
GO:0008270Molecular Functionzinc ion bindingInterproscan
GO:0046872Molecular Functionmetal ion bindingInterproscan

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