Gene detail

Detailed information of alvinactis_v1_g19569 in Alvinactis idsseensis sp. Nov.

Genomic Location: chr_10:5605043...5607243
NR annotation: XP_031559881.1, FACT complex subunit SSRP1-like [Actinia tenebrosa]

Gene Structure

Sequence

Uniprot

Uniprot term	Description
Q17QH7	TCF3 fusion partner homolog OS=Bos taurus OX=9913 GN=TFPT PE=2 SV=1
Q3U1J1	TCF3 fusion partner homolog OS=Mus musculus OX=10090 GN=Tfpt PE=1 SV=1
Q9JMG6	TCF3 fusion partner homolog OS=Rattus norvegicus OX=10116 GN=Tfpt PE=1 SV=2

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF00505	HMG_box	HMG (high mobility group) box	Domain	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR050342	Family	High Mobility Group Box (HMGB)	Interproscan
IPR036910	Homologous_superfamily	High mobility group box domain superfamily	Interproscan
IPR009071	Domain	High mobility group box domain	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR48112	HIGH MOBILITY GROUP PROTEIN DSP1	Interproscan

Gene Ontology

GO terms	Category	Description	Source
GO:0000976	Molecular Function	transcription cis-regulatory region binding	Interproscan
GO:0006357	Biological Process	regulation of transcription by RNA polymerase II	Interproscan
GO:0008301	Molecular Function	DNA binding, bending	Interproscan

KEGG pathway

KO	Enzyme	Enzyme ID	pathway	mapID	Source
K11680	NHP10; non-histone protein 10	-	Chromosome and associated proteins	ko03036	deepkoala