Detailed information of alvinactis_v1_g20323 in Alvinactis idsseensis sp. Nov.

Genomic Location: chr_10:16639555...16653442
NR annotation: XP_020915009.1, circadian locomoter output cycles protein kaput [Exaiptasia diaphana]


 Gene Structure
More details in Jbrowse  Sequence
CDS
Transcript
Protein
 Uniprot
Uniprot termDescription
Q5ZQU2Neuronal PAS domain-containing protein 2 OS=Gallus gallus OX=9031 GN=NPAS2 PE=1 SV=1
Q99743Neuronal PAS domain-containing protein 2 OS=Homo sapiens OX=9606 GN=NPAS2 PE=1 SV=3
P97460Neuronal PAS domain-containing protein 2 OS=Mus musculus OX=10090 GN=Npas2 PE=1 SV=1
 Gene family
Gene familySubfamily
Transcription Factors FamilybHLH

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF14598PAS_11PAS domainDomainInterproscan
PF00010HLHHelix-loop-helix DNA-binding domainDomainInterproscan
PF00989PASPAS foldDomainInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR036638Homologous_superfamilyHelix-loop-helix DNA-binding domain superfamilyInterproscan
IPR050933FamilyCircadian Clock Transcription FactorsInterproscan
IPR011598DomainMyc-type, basic helix-loop-helix (bHLH) domainInterproscan
IPR000014DomainPAS domainInterproscan
IPR035965Homologous_superfamilyPAS domain superfamilyInterproscan
IPR013767DomainPAS foldInterproscan
IPR001067FamilyNuclear translocatorInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR23042CIRCADIAN PROTEIN CLOCK/ARNT/BMAL/PASInterproscan

 Gene Ontology
GO termsCategoryDescriptionSource
GO:0046983Molecular Functionprotein dimerization activityInterproscan
GO:0000978Molecular FunctionRNA polymerase II cis-regulatory region sequence-specific DNA bindingInterproscan
GO:0000981Molecular FunctionDNA-binding transcription factor activity, RNA polymerase II-specificInterproscan
GO:0005634Cellular ComponentnucleusInterproscan
GO:0006357Biological Processregulation of transcription by RNA polymerase IIInterproscan
GO:0034751Cellular Componentaryl hydrocarbon receptor complexInterproscan
GO:0006355Biological Processregulation of DNA-templated transcriptionInterproscan
GO:0003700Molecular FunctionDNA-binding transcription factor activityInterproscan
GO:0005667Cellular Componenttranscription regulator complexInterproscan
GO:0005737Cellular ComponentcytoplasmInterproscan

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