Detailed information of alvinactis_v1_g23137 in Alvinactis idsseensis sp. Nov.

Genomic Location: chr_12:9632286...9650786
NR annotation: XP_031558310.1, U4/U6.U5 tri-snRNP-associated protein 2-like [Actinia tenebrosa]


 Gene Structure
More details in Jbrowse  Sequence
CDS
Transcript
Protein
 Uniprot
Uniprot termDescription
Q53GS9Ubiquitin carboxyl-terminal hydrolase 39 OS=Homo sapiens OX=9606 GN=USP39 PE=1 SV=2
Q3TIX9Ubiquitin carboxyl-terminal hydrolase 39 OS=Mus musculus OX=10090 GN=Usp39 PE=1 SV=2
Q5R761Ubiquitin carboxyl-terminal hydrolase 39 OS=Pongo abelii OX=9601 GN=USP39 PE=2 SV=1
 Gene family
Gene familySubfamily
Ubiquitin FamilyDUB|USP|USP

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF02148zf-UBPZn-finger in ubiquitin-hydrolases and other proteinDomainInterproscan
PF00443UCHUbiquitin carboxyl-terminal hydrolaseFamilyInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR001607DomainZinc finger, UBP-typeInterproscan
IPR028889DomainUbiquitin specific protease domainInterproscan
IPR033809FamilyUSP39Interproscan
IPR050185FamilyUbiquitin carboxyl-terminal hydrolaseInterproscan
IPR038765Homologous_superfamilyPapain-like cysteine peptidase superfamilyInterproscan
IPR001394DomainPeptidase C19, ubiquitin carboxyl-terminal hydrolaseInterproscan
IPR013083Homologous_superfamilyZinc finger, RING/FYVE/PHD-typeInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR21646UBIQUITIN CARBOXYL-TERMINAL HYDROLASEInterproscan

 Gene Ontology
GO termsCategoryDescriptionSource
GO:0008270Molecular Functionzinc ion bindingInterproscan
GO:0000245Biological Processspliceosomal complex assemblyInterproscan
GO:0006397Biological ProcessmRNA processingInterproscan
GO:0004843Molecular Functioncysteine-type deubiquitinase activityInterproscan
GO:0016579Biological Processprotein deubiquitinationInterproscan

 KEGG pathway
KOEnzymeEnzyme IDpathwaymapIDSource
K12847USP39, SAD1; U4/U6.U5 tri-snRNP-associated protein 2-Spliceosomeko03041deepkoala

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