Detailed information of alvinactis_v1_g24401 in Alvinactis idsseensis sp. Nov.

Genomic Location: chr_13:3827995...3896852
NR annotation: XP_020910770.1, cleavage and polyadenylation specificity factor subunit 1 [Exaiptasia diaphana]


 Gene Structure
More details in Jbrowse  Sequence
CDS
Transcript
Protein
 Uniprot
Uniprot termDescription
A0A0R4IC37Cleavage and polyadenylation specificity factor subunit 1 OS=Danio rerio OX=7955 GN=cpsf1 PE=3 SV=2
Q10569Cleavage and polyadenylation specificity factor subunit 1 OS=Bos taurus OX=9913 GN=CPSF1 PE=1 SV=1
Q9EPU4Cleavage and polyadenylation specificity factor subunit 1 OS=Mus musculus OX=10090 GN=Cpsf1 PE=1 SV=1
 Gene family
Gene familySubfamily
Ubiquitin FamilyE3|E3 adaptor Cullin RING|DDB1

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF18382Formin_GBD_NFormin N-terminal GTPase-binding domainDomainInterproscan
PF10433MMS1_NMono-functional DNA-alkylating methyl methanesulfonate N-termRepeatInterproscan
PF03178CPSF_ACPSF A subunit regionRepeatInterproscan
PF02181FH2Formin Homology 2 DomainFamilyInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR041387DomainFHOD1, N-terminal GTPase-binding domainInterproscan
IPR015425DomainFormin, FH2 domainInterproscan
IPR011989Homologous_superfamilyArmadillo-like helicalInterproscan
IPR015943Homologous_superfamilyWD40/YVTN repeat-like-containing domain superfamilyInterproscan
IPR042201Homologous_superfamilyFormin, FH2 domain superfamilyInterproscan
IPR018846DomainCleavage/polyadenylation specificity factor, A subunit, N-terminalInterproscan
IPR004871DomainCleavage/polyadenylation specificity factor, A subunit, C-terminalInterproscan
IPR016024Homologous_superfamilyArmadillo-type foldInterproscan
IPR014768DomainRho GTPase-binding/formin homology 3 (GBD/FH3) domainInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR45920FORMIN HOMOLOGY 2 DOMAIN CONTAINING, ISOFORM IInterproscan

 Gene Ontology
GO termsCategoryDescriptionSource
GO:0005515Molecular Functionprotein bindingInterproscan
GO:0003676Molecular Functionnucleic acid bindingInterproscan
GO:0005634Cellular ComponentnucleusInterproscan
GO:0005737Cellular ComponentcytoplasmInterproscan
GO:0005856Cellular ComponentcytoskeletonInterproscan
GO:0030866Biological Processcortical actin cytoskeleton organizationInterproscan
GO:0051015Molecular Functionactin filament bindingInterproscan

TOP