Detailed information of alvinactis_v1_g24981 in Alvinactis idsseensis sp. Nov.

Genomic Location: chr_13:11798235...11805449
NR annotation: XP_031569466.1, nucleoporin SEH1-like [Actinia tenebrosa]


 Gene Structure
More details in Jbrowse  Sequence
CDS
Transcript
Protein
 Uniprot
Uniprot termDescription
A7YY75Nucleoporin SEH1 OS=Bos taurus OX=9913 GN=SEH1L PE=2 SV=1
Q96EE3Nucleoporin SEH1 OS=Homo sapiens OX=9606 GN=SEH1L PE=1 SV=3
Q5RAN6Nucleoporin SEH1 OS=Pongo abelii OX=9601 GN=SEH1L PE=2 SV=1
 Gene family
Gene familySubfamily
Ubiquitin FamilyUBD|Other|Beta-prp
Ubiquitin FamilyE3|E3 adaptor Cullin RING|CDC20
Ubiquitin FamilyE3|E3 adaptor Cullin RING|DWD

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF00400WD40WD domain, G-beta repeatRepeatInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR037363FamilySec13/Seh1 familyInterproscan
IPR001680RepeatWD40 repeatInterproscan
IPR020472RepeatG-protein beta WD-40 repeatInterproscan
IPR019775Conserved_siteWD40 repeat, conserved siteInterproscan
IPR015943Homologous_superfamilyWD40/YVTN repeat-like-containing domain superfamilyInterproscan
IPR036322Homologous_superfamilyWD40-repeat-containing domain superfamilyInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR11024NUCLEAR PORE COMPLEX PROTEIN SEC13 / SEH1 FAMILY MEMBERInterproscan

 Gene Ontology
GO termsCategoryDescriptionSource
GO:0005198Molecular Functionstructural molecule activityInterproscan
GO:0031080Cellular Componentnuclear pore outer ringInterproscan
GO:0034198Biological Processcellular response to amino acid starvationInterproscan
GO:0035859Cellular ComponentSeh1-associated complexInterproscan
GO:1904263Biological Processpositive regulation of TORC1 signalingInterproscan
GO:0005515Molecular Functionprotein bindingInterproscan

 KEGG pathway
KOEnzymeEnzyme IDpathwaymapIDSource
K14299SEH1; nucleoporin SEH1-Membrane traffickingko04131deepkoala

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