Detailed information of alvinactis_v1_g2986 in Alvinactis idsseensis sp. Nov.

Genomic Location: chr_2:2985079...2986710
NR annotation: XP_020916001.1, COUP transcription factor 2 isoform X2 [Exaiptasia diaphana]


 Gene Structure
More details in Jbrowse  Sequence
CDS
Transcript
Protein
 Uniprot
Uniprot termDescription
Q60632COUP transcription factor 1 OS=Mus musculus OX=10090 GN=Nr2f1 PE=2 SV=2
P10589COUP transcription factor 1 OS=Homo sapiens OX=9606 GN=NR2F1 PE=1 SV=1
Q9TTR8COUP transcription factor 1 OS=Bos taurus OX=9913 GN=NR2F1 PE=2 SV=1
 Gene family
Gene familySubfamily
Transcription Factors FamilyMiscellaneous
Transcription Factors FamilyNGFIB-like
Transcription Factors FamilySF-like
Transcription Factors FamilyTHR-like
Transcription Factors FamilyGCNF-like

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF00105zf-C4Zinc finger, C4 type (two domains)DomainInterproscan
PF00104Hormone_recepLigand-binding domain of nuclear hormone receptorDomainInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR001628DomainZinc finger, nuclear hormone receptor-typeInterproscan
IPR050274FamilyNuclear hormone receptor family NR2 subfamilyInterproscan
IPR035500Homologous_superfamilyNuclear hormone receptor-like domain superfamilyInterproscan
IPR000536DomainNuclear hormone receptor, ligand-binding domainInterproscan
IPR013088Homologous_superfamilyZinc finger, NHR/GATA-typeInterproscan
IPR001723FamilyNuclear hormone receptorInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR24083NUCLEAR HORMONE RECEPTORInterproscan

 Gene Ontology
GO termsCategoryDescriptionSource
GO:0003700Molecular FunctionDNA-binding transcription factor activityInterproscan
GO:0006355Biological Processregulation of DNA-templated transcriptionInterproscan
GO:0008270Molecular Functionzinc ion bindingInterproscan
GO:0043565Molecular Functionsequence-specific DNA bindingInterproscan
GO:0000978Molecular FunctionRNA polymerase II cis-regulatory region sequence-specific DNA bindingInterproscan
GO:0004879Molecular Functionnuclear receptor activityInterproscan
GO:0006357Biological Processregulation of transcription by RNA polymerase IIInterproscan
GO:0030154Biological Processcell differentiationInterproscan
GO:0048856Biological Processanatomical structure developmentInterproscan

 KEGG pathway
KOEnzymeEnzyme IDpathwaymapIDSource
K08547NR2F1, TFCOUP1; COUP transcription factor 1-Nuclear receptorsko03310deepkoala

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