Detailed information of alvinactis_v1_g30240 in Alvinactis idsseensis sp. Nov.

Genomic Location: chr_16:15581718...15646603
NR annotation: XP_031562959.1, EF-hand calcium-binding domain-containing protein 6-like [Actinia tenebrosa]


 Gene Structure
More details in Jbrowse  Sequence
CDS
Transcript
Protein
 Uniprot
Uniprot termDescription
Q95LD9Aryl hydrocarbon receptor OS=Delphinapterus leucas OX=9749 GN=AHR PE=2 SV=1
P35869Aryl hydrocarbon receptor OS=Homo sapiens OX=9606 GN=AHR PE=1 SV=2
Q8R4S2Aryl hydrocarbon receptor OS=Mus spretus OX=10096 GN=Ahr PE=2 SV=1
 Gene family
Gene familySubfamily
Transcription Factors FamilybHLH

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF00989PASPAS foldDomainInterproscan
PF08976EF-hand_11EF-hand domainDomainInterproscan
PF13499EF-hand_7EF-hand domain pairDomainInterproscan
PF00010HLHHelix-loop-helix DNA-binding domainDomainInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR002048DomainEF-hand domainInterproscan
IPR011598DomainMyc-type, basic helix-loop-helix (bHLH) domainInterproscan
IPR013767DomainPAS foldInterproscan
IPR000014DomainPAS domainInterproscan
IPR052603FamilyEF-hand calcium-binding domain-containing protein 6Interproscan
IPR036638Homologous_superfamilyHelix-loop-helix DNA-binding domain superfamilyInterproscan
IPR015070DomainDJBP, EF-hand domainInterproscan
IPR035965Homologous_superfamilyPAS domain superfamilyInterproscan
IPR011992Homologous_superfamilyEF-hand domain pairInterproscan
IPR001067FamilyNuclear translocatorInterproscan
IPR018247Binding_siteEF-Hand 1, calcium-binding siteInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR20875EF-HAND CALCIUM-BINDING DOMAIN-CONTAINING PROTEIN 6-RELATEDInterproscan

 Gene Ontology
GO termsCategoryDescriptionSource
GO:0005509Molecular Functioncalcium ion bindingInterproscan
GO:0046983Molecular Functionprotein dimerization activityInterproscan
GO:0006355Biological Processregulation of DNA-templated transcriptionInterproscan
GO:0003700Molecular FunctionDNA-binding transcription factor activityInterproscan
GO:0005634Cellular ComponentnucleusInterproscan
GO:0005667Cellular Componenttranscription regulator complexInterproscan
GO:0005737Cellular ComponentcytoplasmInterproscan

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