Detailed information of alvinactis_v1_g30606 in Alvinactis idsseensis sp. Nov.

Genomic Location: chr_17:678486...687498
NR annotation: RUA04597.1, hypothetical protein DSY43_06010 [Gammaproteobacteria bacterium]


 Gene Structure
More details in Jbrowse  Sequence
CDS
Transcript
Protein
 Gene family
Gene familySubfamily
Ubiquitin FamilyE3|E3 activity|HECT

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF01410COLFIFibrillar collagen C-terminal domainFamilyInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR036056Homologous_superfamilyFibrinogen-like, C-terminalInterproscan
IPR035983Homologous_superfamilyHECT, E3 ligase catalytic domainInterproscan
IPR000885DomainFibrillar collagen, C-terminalInterproscan
IPR002181DomainFibrinogen, alpha/beta/gamma chain, C-terminal globular domainInterproscan
IPR000569DomainHECT domainInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR16146INTELECTINInterproscan

 Gene Ontology
GO termsCategoryDescriptionSource
GO:0004842Molecular Functionubiquitin-protein transferase activityInterproscan
GO:0005201Molecular Functionextracellular matrix structural constituentInterproscan
GO:0005615Cellular Componentextracellular spaceInterproscan
GO:0070492Molecular Functionoligosaccharide bindingInterproscan

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