Detailed information of alvinactis_v1_g3063 in Alvinactis idsseensis sp. Nov.

Genomic Location: chr_2:4237927...4239372
NR annotation: XP_020905893.1, methyl-CpG-binding domain protein 3 [Exaiptasia diaphana]


 Gene Structure
More details in Jbrowse  Sequence
CDS
Transcript
Protein
 Uniprot
Uniprot termDescription
Q9Z2E1Methyl-CpG-binding domain protein 2 OS=Mus musculus OX=10090 GN=Mbd2 PE=1 SV=2
Q9UBB5Methyl-CpG-binding domain protein 2 OS=Homo sapiens OX=9606 GN=MBD2 PE=1 SV=1
Q9Z2D8Methyl-CpG-binding domain protein 3 OS=Mus musculus OX=10090 GN=Mbd3 PE=1 SV=1
 Gene family
Gene familySubfamily
Transcription Factors FamilyMBD

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF14048MBD_CC-terminal domain of methyl-CpG binding protein 2 and 3FamilyInterproscan
PF01429MBDMethyl-CpG binding domainDomainInterproscan
PF16564MBDap55-binding region of Methyl-CpG-binding domain proteins MBDDomainInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR025884DomainMethyl-CpG binding protein 2/3, C-terminal domainInterproscan
IPR001739DomainMethyl-CpG DNA bindingInterproscan
IPR016177Homologous_superfamilyDNA-binding domain superfamilyInterproscan
IPR032343DomainMethyl-CpG-binding domain protein 2/3, p55-binding regionInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR12396METHYL-CPG BINDING PROTEIN, MBDInterproscan

 Gene Ontology
GO termsCategoryDescriptionSource
GO:0000122Biological Processnegative regulation of transcription by RNA polymerase IIInterproscan
GO:0005634Cellular ComponentnucleusInterproscan
GO:0006346Biological ProcessDNA methylation-dependent constitutive heterochromatin formationInterproscan
GO:0008327Molecular Functionmethyl-CpG bindingInterproscan
GO:0003677Molecular FunctionDNA bindingInterproscan

 KEGG pathway
KOEnzymeEnzyme IDpathwaymapIDSource
K11590MBD2; methyl-CpG-binding domain protein 2-Chromosome and associated proteinsko03036deepkoala

TOP