Detailed information of alvinactis_v1_g4889 in Alvinactis idsseensis sp. Nov.

Genomic Location: chr_2:33023904...33049945
NR annotation: XP_020914252.1, AT-rich interactive domain-containing protein 1A [Exaiptasia diaphana]


 Gene Structure
More details in Jbrowse  Sequence
CDS
Transcript
Protein
 Uniprot
Uniprot termDescription
A2BH40AT-rich interactive domain-containing protein 1A OS=Mus musculus OX=10090 GN=Arid1a PE=1 SV=1
O14497AT-rich interactive domain-containing protein 1A OS=Homo sapiens OX=9606 GN=ARID1A PE=1 SV=3
E9Q4N7AT-rich interactive domain-containing protein 1B OS=Mus musculus OX=10090 GN=Arid1b PE=1 SV=2
 Gene family
Gene familySubfamily
Transcription Factors FamilyARID

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF01388ARIDARID/BRIGHT DNA binding domainDomainInterproscan
PF12031BAF250_CSWI/SNF-like complex subunit BAF250/Osa RepeatInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR036431Homologous_superfamilyARID DNA-binding domain superfamilyInterproscan
IPR001606DomainARID DNA-binding domainInterproscan
IPR021906FamilySWI/SNF-like complex subunit BAF250/OsaInterproscan
IPR033388DomainSWI/SNF-like complex subunit BAF250, C-terminalInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR12656BRG-1 ASSOCIATED FACTOR 250 BAF250Interproscan

 Gene Ontology
GO termsCategoryDescriptionSource
GO:0003677Molecular FunctionDNA bindingInterproscan
GO:0005654Cellular ComponentnucleoplasmInterproscan
GO:0006338Biological Processchromatin remodelingInterproscan
GO:0006357Biological Processregulation of transcription by RNA polymerase IIInterproscan
GO:0016514Cellular ComponentSWI/SNF complexInterproscan
GO:0031491Molecular Functionnucleosome bindingInterproscan
GO:0035060Cellular Componentbrahma complexInterproscan
GO:0045893Biological Processpositive regulation of DNA-templated transcriptionInterproscan
GO:0071565Cellular ComponentnBAF complexInterproscan

 KEGG pathway
KOEnzymeEnzyme IDpathwaymapIDSource
K11653ARID1; AT-rich interactive domain-containing protein 1-Chromosome and associated proteinsko03036deepkoala

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