Gene detail

Detailed information of alvinactis_v1_g5247 in Alvinactis idsseensis sp. Nov.

Genomic Location: chr_2:38240485...38247507
NR annotation: KXJ24373.1, hypothetical protein AC249_AIPGENE22681 [Exaiptasia diaphana]

Gene Structure

More details in Jbrowse

Sequence

CDS

alvinactis_v1_g5247

ATGCGAAACGCAGTTCAGGTCTCTGTACAAGAAGCTCTTCCAATAGAAGAAAACCGTCAATCAAGATCTTCACTGTTCGCTGTTTACAGTTCCATCTCCTCGGCAATGACGAGAATGAGCTCTTATCTCGTGGGATGGTGGGATAGAAATCCAGCAGAAACCAAAACACCAACCCCGACTCCACAAACTAAAGAGGTTCCATCGTGTCGCGCGATTGTACTCTATCAAGACCGGCAGTCAGTCGTGCCAGTGAAGGATGCACGACAAAATTCCGACAGCCATCAGCCACTGCGCGTCACTCTAAAATCGATATTGCTGCAATGTGGAAGCCGAAGCAACAACCAGGTTGACGTACAGCTGGCACTTCCTTTGTCTGGACTTTGCAGTATTAGCTGTCGTTTATGCAAGACATTACGACCTGAAGTCATCTTTGAAGTGAGGTGCATCAGCAAGCAGTTCTTCAAGGACGTCGACACTTCCGTTCAAGGACTTGCTCTACCAGCTAACGTCATTCTTGTACCATCTCCCGTCGACTTTTGCACAAAGATCTTCATTCAACTACCAATTGCTAGGCAATCTCTTCCCATGCTTACTTTCTATAATGATCCAAGAAGCCACATCCAACAACAACCTGAAATTGAACTAAGAATCCATCTACCAGGAGTTGACGTTGTGAGCGCACGTTTCTGTGTGCTGTTCAGGCCTGAAAAGCTCGTTCAGATCAGATGTTCTAAAGGATATTTCAAAGAAATTGTCAAATACATGGAAATACTTGGTCTTCCTTTGCCAAAGCGAATCTCAGGTGCCAAAGCCATCGCTGGTTCTGAGATCGTTCCACACACAGACGTGGTTGAACCTCTTAATGCTAACTGTACTTCCTTTACAACGATCTGCATCAGTCAAAGATATGAGCAAGTTGAAGTTAAGATCAACATGACATTGTCAGGGCTTTGTCACATCAGTGCCCGTCTGTGCGCACTTTTTAGACCTGAAACCATCATGGACGTCACATACTCGCGAGAAGTGTTCCACGAAGTTGCAAGATATATCAGTCTTGTTGTCCCTCGTACAATCATTGCTACAGCTTTACCTTCAACAACGCCTAGTTCTGAGGGCACGCCATGCAAAATCACTGACTTGCCAAGTGTGATGTCTGTTCCAGAAAAAGTTCAACTAGATCCGCGCACTGCGAAGCTCACAGACAATGAACTAGAAGATGCTTGCATATCATCTGCCTTACTGTCAGGACACGATTGTAATCATAACTCATCTAAGATAAAGTGTTGCGATACATTGACTGGCTCAGAAATATTCTTTGGCATCAAGAATAAAATGCCTGATGTGAACAACAACAAGATCGATGGCCGCATACAGCCAAAGCCTCTTCTAGCATCACCATCGTTACTGTTTGCCAAGGCAGTACAAGAGTTGGCAACTACCAGAATGGCAACAGACGAAAGGACCCAGACTGACACAAATTCAGAGGGTTCTACACAAAAGTTCTGTGAACTAGACGATGACGAAACACCTTCATTTCCAACAGCAACACTAGATACTCTGAAAGAGAGTTCTAAGGTCAACACCTTTATCATTGAgcaagagagtagcatttgtaatgttagcagcaacatggatgacagcaaacagccgaaacctcttctagcaccaccatcgttactgtttgagaaagcagtaaaagcgttgtcagcaactgcagtggctttaaaagagaggactcagaatgattcaaaatctggacaaccaccactacagtcagatgacaccataccaacagcattattcggagacgatgtccaggaagaggatcaggctaacacaacagcaatgctaaacaaggaaaaccatgatgacatccttcaagaaagaacggaggcgtttgttcggcaagaaagtagcattgacagtgttagcagcaacaaagatgccagcaaacagccaaaacctcttctagcaccaccatcgttactgtttgagaaagcagtaaaagcattgtcagcaactgctgtggctttaaaagagagaactcagaatgatacaaaaactggacaaccaccactacagtcagatgacaccataccaacagtatcagtcggagacgatgtccaggtagaggatcagtctaacacagtagcaacgctaaacaaggaaaaccatgttgacattcttcaagaaagaacggaAGATAATTACCAGGTGTCAAGTCTAGTTAGTGTACTACCAGAACCGCCAGTGGACGAGGTCTCGTACGATATACCAGCTCCTTCAGTAACACAGCTTCAACTAGACATTCATGCAGAACGTGTTGATAATCGATCTGAGATGGAAGTCCGAGTAGCAAGAGATTCCAAGTTACTTCGAGAACCGCCAGTGCAGAAGCTCTCGTTAGCTTTTGACATTCACGAAATACCAGTTCCTTCAGAATCGGAAATTCAGTTAACCATTCATGCTGTCCGTACTCCTGTACCATCTACAACTGATATTGTCTTGGAAGATGAAGGGACATCATTAGACGAGATCCAGGATGAAGACCCTAGCATAGTGTTCCTTGATGTGAAAGAAGTTCATTCGTTAAACGATGCTGTAAGAACTGCAGTAACAAAGATGGGTGATGTTCAAGTAGTGAAATTGGTCACAGCCTCTCTGGAACAATTACCAGATGTGGTTCAGCAAGAATACCAGAGTGCCAGTGGTTCAGTATTATCTGTAGGAGATTACCAGACTACAGATGAGGTCAACACAGTACCAATTGCAGTTACAAACGTGGTTCCAGGACAAGGTTCAATATCAGCTGGAGACGTTCCGGTATCAATTCAACATGATACGATAAGCATATCATTGGCAGACGAGGTACAAGTGGCAGAGCCACTATGCATAATTACTGCAGCACCACTTCCAAATGTATTATCATTAGCAGAAGAAGTGCAGACTACAGGGCAACATAACCCCGTACAGGTAGCAGTAGTAGATGACGTCCAGGTAGCAGATCAAATCAACACAACTCCAGTGGAGAAATCAACTAGCAGTAATGAGGAGATTCCAATTTACAATGTGAAGACAAACAATATTCCGCAGATCAGAGCTTCTCCACTACTTCAGAATGCCAACATGAGTGTATCTACAAACGAGTCTTTGCTGGCCTCAAATGATACTTGCTCTGCTTTGGGGGAACATCGCAACCTTGCAGAATGCGGCTATCCAAATGACTCGCTTCACATACAAACCATAGAGCAAGCTGTAGGTAGCAATTGTGCTGTATCTGTAGAGCAAACACTTGTAGTTGAAGGGCAACCGAATAACACAACATGGGTTAATGTTCCAATGCATAGTGGCAATTTGTACGCTACTGGTGGTGGAGAGCGATCAAACGTCTCTAACTATGAATTTCATAATGGTGTTTCAAATCCATCTCAAGTGATTGGAGCATTTCAGACCACAATGCAGGATTTTCCAATCCAGTCAATGGAGACCCAACAGTCTCTACAGTTTCAGGATCTGGGTGTGAAACGACAGATGAGCGACACAGAGATGGTTAAAAGGGAATCTTTGATGAGTATTGAATCCTGTACTTCAGAAACTGAAGTCATGGACAGTGAAGACAGCAATTGCCAAGAAGTATTTAGTTCCCAGTTTACGAGTAAACCCAAGAAACCCCAAAAAGTACTTTTGCCCACGTTTAGGAAAAACACCTCAGCTTCATCCAATCAATCTGGAATTCAGAATTCGACTTTTGGTGGAAACCAGTCAGCAttctctggaaatactgctcaaactcctgcacaaacttggacatttggtgcaagcaacccatcaaaccagtcggtgttctctggaaatgctgctcaaactcctgcacaaacttggacatttggtgcaagcaacccatcaaaccagtcggtgttctcGAGTAATGTGGCACAGCAATCTGGACAGACGTTGCcatttggtgcaaacaacaacacatcaaagcagtcgtcagtgttgtcagggaaaacagctcagaatgcttgggatacttttgcatttggtgcaaacaacaacacatcaaagcagtcgtcagtgttgtcagggaaaacagctcagaatgcttgggatacttttgcatttggtgcaaacaacaacacatcaaagcagtcgtcagtgttgtcagggaaaacagctcagaatgcttgggatacttttgcatttggtgcaaacaacaacacatcaaagcagtcgtcagtgttgtcagggaaaacagctcagaatgcttgggatacttttgcatttggtgcaagcaacaCGCCAAAACAGTCGTTAGTGTTATCAGGTAACGCGACAGAAAACTCTAAGCAGACTTTAGTATTTGGTTCAAACAACCCGTCAAACCAGTCATTGATCTCTGATAATACGTCACAAAACCTTGAAAAGCAGTCGTCATGTAAAACCACAAGATTCAACTATTTTGGAAATCCGTACGTCAGCCCGCTACATTGTTGCGTTCACCCTAATGAGTCGTCAAAATATTCTCTTTTTGGAGAACCGTATGTGAGTCCACTGCATTGCTGTAAACACCCTAATGCGTATGGGCGTTCCCATCAGTTCAGTTTCTCATTAGGAGACCGATATCTTCCTATCAGCCAAAGAGAAAGCAACTCTCAAAGCCACGCAGAACCACTAAGAGATGGTGAAGGATTCCCATGTTCTGAGTATATCAAGTTTGACCCTGTTGATTTGCAATTGTCCACCTATGGAAATCCAACTACACCTGATAGCCAAGGATTACTTACTGAAATTTCTGTGCAGAAAACTTCTGGTAAGATCCAAAGTACTTCGTATTTTGGGGATTTGTACGAAGGCCCTCAGTGTACTTGTGGACGCCTCACAACAGACTTACAAAAGTACACGGCATCTACCTTTGAACCAAGCAAGCTTACTCGTACCAGTAATACAGAGAACAACAATCGAAGTAATGTACAGGCAACACATTCTAGAGATAATGGAGCAAGTCAATTACCTGCGTTGGAGAACAAGGAATTGACGGTCACCCAGAATATCGTCTCGTCGAACAATGGAGTAGACCTCACTCGTGGCGTGTTTGCCAGTATGGAAGATGTGTCCGAAAAGCTGTATAATGGAAGAAAGCCTGAAGGTTTGGATTCAACAAATACTATGCAGGAAAAGTGGTCACCTGTGATTATTATCAATACTTGTGAAGGTTGTGCTCGAACTATTGCTAATGCAGTCAATTTGGAAAACACTAAAGTGCAAGGGCAGCATTCCAACGAGACATCGACGAAAAATTGTGAAGCTGACAAGGAAAATGCTGTTGAAATAAAACAAACGGAAGGAAAAGATAGTATCGATAAAGCCATTACCACCAAGAAGCCTAGTCCAGTGGCGAAAGAGATTGTCCAATGTGGCACGCAAGAGGAGGATTCAAAATATGTTTCTGAAGAATCTACCAATACAGACGACGACGCTGATCAGGCAAGCCATATTTTTGTGATACCAAAGATCGATACTGAACATATTATAGGACTTGTCAAACAACGCTTAGCTGAAGAGTTAGCATTGAAACGTCACCAAGCGACCACCGAAGTTGCATCGAACAACGAACAGCATGTTGCTTACTCTGCAACAGCAGCATCGTCCTCTCCTCAGACTACAAATCTTCTAGTTAAATACTCCTCCAAGCACCCATTTGCACCAACACCTTTACCGTCTAAAAACGACAACACAAGACAAGAGTCTAGTGGAGAATGTAACAACGTAGAGGACAGCACAATCAATTCTCCACATTTGCTGAATCAAACAGCAGAGAAAGATGATGGATCACCGCAATGCAATGAGAAGGATTTAACCCTTGACGAAAAAGATCAACCTTGTAGTGCCTCTTCAGCTCGTGCTGAACAAGATCAGACGACGGCAAATGATACGACAACGACAGATCCTCCCACACACCACCAAGAAGTGTGTAGACAGCTTGAAGTATGTACTCAGGATATTCAGAATCTAACACGTCTCATGGCCAGCACTTACGGGATTTCTCAACCTCAGCATAAGCCACGTAACGTGGCACCGACCATCATTCGAAGGGTGGGACCGAAGAAGCAAGCTCCTGTGGTCTCTAAAGCCAAGAGAGTTTGCTTTGGGGTGGCACAAGTTATCTTCCCTCGGTCATCCAACTTATCATTGCGGAAGAGAACTTTAACGAAAGTCAATGCTGACGAGGACGCAAATCTCCCTCATAAAGTCAAGCGTAGAATTTCAGAATACGAGGTCGCCGAGGCTGCTTTAAAGCCCATCACAACCGACACCGTCCAGCAAAGCAGACGGGTAATGAAGAGAGAAACCATTCCTGAGGCAGTGAAACGTGAAACAAGAAAGAGAAGATTTAGTTCCACACAGGACAGTACCATAGGTAACAACACCCCAGCAACACCTGTGGCGGATACAAGGGCGATTATTAAAGCTATCAGAAGCAAGAAAAACTAA

Transcript

alvinactis_v1_g5247

Protein

alvinactis_v1_g5247

MRNAVQVSVQEALPIEENRQSRSSLFAVYSSISSAMTRMSSYLVGWWDRNPAETKTPTPTPQTKEVPSCRAIVLYQDRQSVVPVKDARQNSDSHQPLRVTLKSILLQCGSRSNNQVDVQLALPLSGLCSISCRLCKTLRPEVIFEVRCISKQFFKDVDTSVQGLALPANVILVPSPVDFCTKIFIQLPIARQSLPMLTFYNDPRSHIQQQPEIELRIHLPGVDVVSARFCVLFRPEKLVQIRCSKGYFKEIVKYMEILGLPLPKRISGAKAIAGSEIVPHTDVVEPLNANCTSFTTICISQRYEQVEVKINMTLSGLCHISARLCALFRPETIMDVTYSREVFHEVARYISLVVPRTIIATALPSTTPSSEGTPCKITDLPSVMSVPEKVQLDPRTAKLTDNELEDACISSALLSGHDCNHNSSKIKCCDTLTGSEIFFGIKNKMPDVNNNKIDGRIQPKPLLASPSLLFAKAVQELATTRMATDERTQTDTNSEGSTQKFCELDDDETPSFPTATLDTLKESSKVNTFIIEQESSICNVSSNMDDSKQPKPLLAPPSLLFEKAVKALSATAVALKERTQNDSKSGQPPLQSDDTIPTALFGDDVQEEDQANTTAMLNKENHDDILQERTEAFVRQESSIDSVSSNKDASKQPKPLLAPPSLLFEKAVKALSATAVALKERTQNDTKTGQPPLQSDDTIPTVSVGDDVQVEDQSNTVATLNKENHVDILQERTEDNYQVSSLVSVLPEPPVDEVSYDIPAPSVTQLQLDIHAERVDNRSEMEVRVARDSKLLREPPVQKLSLAFDIHEIPVPSESEIQLTIHAVRTPVPSTTDIVLEDEGTSLDEIQDEDPSIVFLDVKEVHSLNDAVRTAVTKMGDVQVVKLVTASLEQLPDVVQQEYQSASGSVLSVGDYQTTDEVNTVPIAVTNVVPGQGSISAGDVPVSIQHDTISISLADEVQVAEPLCIITAAPLPNVLSLAEEVQTTGQHNPVQVAVVDDVQVADQINTTPVEKSTSSNEEIPIYNVKTNNIPQIRASPLLQNANMSVSTNESLLASNDTCSALGEHRNLAECGYPNDSLHIQTIEQAVGSNCAVSVEQTLVVEGQPNNTTWVNVPMHSGNLYATGGGERSNVSNYEFHNGVSNPSQVIGAFQTTMQDFPIQSMETQQSLQFQDLGVKRQMSDTEMVKRESLMSIESCTSETEVMDSEDSNCQEVFSSQFTSKPKKPQKVLLPTFRKNTSASSNQSGIQNSTFGGNQSAFSGNTAQTPAQTWTFGASNPSNQSVFSGNAAQTPAQTWTFGASNPSNQSVFSSNVAQQSGQTLPFGANNNTSKQSSVLSGKTAQNAWDTFAFGANNNTSKQSSVLSGKTAQNAWDTFAFGANNNTSKQSSVLSGKTAQNAWDTFAFGANNNTSKQSSVLSGKTAQNAWDTFAFGASNTPKQSLVLSGNATENSKQTLVFGSNNPSNQSLISDNTSQNLEKQSSCKTTRFNYFGNPYVSPLHCCVHPNESSKYSLFGEPYVSPLHCCKHPNAYGRSHQFSFSLGDRYLPISQRESNSQSHAEPLRDGEGFPCSEYIKFDPVDLQLSTYGNPTTPDSQGLLTEISVQKTSGKIQSTSYFGDLYEGPQCTCGRLTTDLQKYTASTFEPSKLTRTSNTENNNRSNVQATHSRDNGASQLPALENKELTVTQNIVSSNNGVDLTRGVFASMEDVSEKLYNGRKPEGLDSTNTMQEKWSPVIIINTCEGCARTIANAVNLENTKVQGQHSNETSTKNCEADKENAVEIKQTEGKDSIDKAITTKKPSPVAKEIVQCGTQEEDSKYVSEESTNTDDDADQASHIFVIPKIDTEHIIGLVKQRLAEELALKRHQATTEVASNNEQHVAYSATAASSSPQTTNLLVKYSSKHPFAPTPLPSKNDNTRQESSGECNNVEDSTINSPHLLNQTAEKDDGSPQCNEKDLTLDEKDQPCSASSARAEQDQTTANDTTTTDPPTHHQEVCRQLEVCTQDIQNLTRLMASTYGISQPQHKPRNVAPTIIRRVGPKKQAPVVSKAKRVCFGVAQVIFPRSSNLSLRKRTLTKVNADEDANLPHKVKRRISEYEVAEAALKPITTDTVQQSRRVMKRETIPEAVKRETRKRRFSSTQDSTIGNNTPATPVADTRAIIKAIRSKKN*

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
--	--	--	--	--

InterPro

InterPro term	Type	Description	Source
-	-	-	-

PANTHER

PANTHER term	Description	Source
-	-	-

Gene Ontology

GO terms	Category	Description	Source
-	-	-	-