Detailed information of alvinactis_v1_g6448 in Alvinactis idsseensis sp. Nov.

Genomic Location: chr_3:16541543...16551294
NR annotation: XP_020902895.1, transcription factor Sox-7 [Exaiptasia diaphana]


 Gene Structure
More details in Jbrowse  Sequence
CDS
Transcript
Protein
 Uniprot
Uniprot termDescription
Q28GD5Transcription factor Sox-7 OS=Xenopus tropicalis OX=8364 GN=sox7 PE=2 SV=1
O42342Transcription factor Sox-7 OS=Xenopus laevis OX=8355 GN=sox7 PE=2 SV=1
P40646Transcription factor SOX-7 OS=Mus musculus OX=10090 GN=Sox7 PE=1 SV=2
 Gene family
Gene familySubfamily
Transcription Factors FamilyHMG

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF03153TFIIATranscription factor IIA, alpha/beta subunitFamilyInterproscan
PF00505HMG_boxHMG (high mobility group) boxDomainInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR036910Homologous_superfamilyHigh mobility group box domain superfamilyInterproscan
IPR004855FamilyTranscription factor IIA, alpha/beta subunitInterproscan
IPR050140FamilySRY-related HMG-box transcription factorsInterproscan
IPR009071DomainHigh mobility group box domainInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR10270SOX TRANSCRIPTION FACTORInterproscan

 Gene Ontology
GO termsCategoryDescriptionSource
GO:0005672Cellular Componenttranscription factor TFIIA complexInterproscan
GO:0006367Biological Processtranscription initiation at RNA polymerase II promoterInterproscan
GO:0000978Molecular FunctionRNA polymerase II cis-regulatory region sequence-specific DNA bindingInterproscan
GO:0000981Molecular FunctionDNA-binding transcription factor activity, RNA polymerase II-specificInterproscan
GO:0006355Biological Processregulation of DNA-templated transcriptionInterproscan
GO:0009653Biological Processanatomical structure morphogenesisInterproscan
GO:0030154Biological Processcell differentiationInterproscan

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