Gene detail

Detailed information of ctg1049-2.10-1 in Gigantopelta aegis Gene info

Gene ID	Annotation	Chromosome	Start	End	Strand
ctg1049-2.10-1	28S RIBOSOMAL PROTEIN S15, MITOCHONDRIAL	chr4	8520300	8530336	-

Gene Structure

More details in Jbrowse Sequence

CDS

ctg1049-2.10-1

ATGTTGCTTGTTTATGGAATACTCTTCAAGAGGGGTGAAAGCCTCCAAAAAAAATCATGTTCTGCACTAGGGAAAATGGCTTTTGCCATGAAGACTACCAGATCAGACGCCCCAGTGAAGAAACCGGTATCCTTTGACTATTCAGGTGACCTGATTACACAGAAGCCCATTGATCCTTCACTGTTGAAGTGTGGCTTCAAGGAGCTGTCTGAAATCAAACAATCTCACCCTAATGTTCAGCGTTTGTGTAGCATTGAATTTGCAGATGGGAAAGAAGTCAAACAGTACCGGCTTGAACAAATGTCTGACCGAATCGAAAATTTGTTTGGGAAAGATTGCATATATGAATCAATTGTGTCAAAGCTTACTGTGGATATTAGGAACATGATTCAACACTGTCTGCACTTTAATCGGGACAAACGCAGCAAAGCAGTGCTGGTTGAAAAAATACAAAGACGCAAAAAGATGATGAAGTATTTACGTAGACAAGACTACGAACATTTCCAGTGGCTGTTGCGAGAGCTGAAAATTAAATATGTCCTACCACCGGCATATTACGGACAGATTACGCGAAAGTTTCGGCGGAAGGAAGAAGCTGTCCACGAAGCGGTGCGGCTACGACGGGAGAAGCTGAAGACTCTCGAGGGTGAGCTGGCGCAGGAGAGAGTGGAGTTCGAGAAGTACAAGGTGAAGACGCTGGCACAGATCGAGAAGGACATCAGTGATCTGAATCTAGACGCAGACGCCATCAAGAAGAAGCTGGTGAGGAAGATCGAGAAGGAGGAGATCGTCTTTCCACACGGCTGGACGCCCTGAACGTTCGGCAGGACCCAGGTGTTCAAGCATCAGTTGTATTAGCCAGTGATTGAGGAGATTAGCCAATACTTAAAGAGACTTGTTCTATGTGTTCTGCCATTGTTAAGATGTTTCTGACTAATGGAGACTTTTTAATTACTGAAATTATTTAATACGTGTAAAACATTTCCTCTTTTGGCACGGCTGAAATCCAGCACCCAGTTCAGGCATCAGTTACATTAAAGTGACAGATCCTAGTTTTTAAACACTACGGCATGTGATAAGTTAAATTAGAAGTATTTACATTTATTATTTAGAATATTAATTTCTGCACACATGAAGTGGTTCTGGTCATTCAGGTTTTTTAATACTCCAAAATGTATTTTTCATAATTCTAAAAAACACAATCGTCTGAGAAGTAATGGTTATCGAGACAAACTCTAGTTTTTCTTAGATATTATTTCCCTGTTTAAACATCACAGACTTTAGCTTCTCACTGTTATAACGTTATCTAAATGTGTATTACAGGTTTGTAGATTAACTAAACTTAGTGTCCATTTTCACGGGCTGGAACTAGGGTCTGCACCTTAACAAAGAGTTGAAAAGATTAACCAATGCTTGACGAGACTTGTCCCGTGTTTTCTGACATTGTTAAGATATTTTGAACTAACAGAGCCATTTTAATTGCTGAAATAAGGAACATTTTTTCTTGATGTTAATATTATCAGGGTCCATGTATTCCATGTTTCTGATCATCCCAGTGTTTGTAGTTGCTCAAACTTCATTTCTCCCCCTACTATGTTTTTTCATATATATTGGAAGCTATATTTCAGTTAGGGCTATGTCAAACATTAGGATAACCAGAAATATGTTGAATATGAACGCACAGATAATCTAAACAAGCAACTGGGTTTAATATTTAGTTTGGGTTGTTAAACACTCCATGATTCGGTAATGTGCTACAGTGGCAGTACACTCACAACAGTCTCTCGATGGGAAATTTAGAAAACCTAATACAAATACAATTATTAGTTGAAGAGTTGTATTGAAAGTTTATTTAGAACATCTTAAGGTAATCCACACAATTAAATCTAAACATATTTCTGTAGGCATACATGGCCCTGAATTTGTGTGACTTTAGTGCAATGCTTGTATAGATGGTACAAAGTTCGGACAGTTCTCTCGATCTCTTTGTTCTTTGTGAGAAGATGGTATTCCTTGATAATGATTGGGGTTTGGATTACAGTGTTCATGCTGTGCGTAGTTATAGCAGGTATATAACAGTCCTGTAGTGCTATGTGTTTATTTGTAGATTTTCACTGCTAAAATGTGTGTTCTTTAAAAAAAAAAATGATTTTAATACTTTTCTTTGGAGTAGTGCTCCTAGCATAGAAAGTTAACTTTAAGACCTGAAGTACCTATAAAATTATTACCTAACCATGCTATGAACAACTGGGTCCAGATATTTTTCTGTCCGAGTGAACAAATTAAATAGTGTCTCTACAAGTCATTACTCCAGTTTTTGTAGAAGACATAATTCTGTGAATTGCAGACACTTAACAGTTTGTTGCGATATTATGTTATATCAAGAACTACAATAAACTAATATAACAGAATTGATAACTGCTTGTTTCTTTTCCACAGTGATATGGTTGATAGCAAGAACATTTCAGTTCTTTTTAAATTTATAGTTAACTGATGTTAATATTGTTAAACAATATGTCATTTGTAATGTCAATAATTAAAATATCACCACTGATTGTTGTTAATACACTTAACGTACTGGTAGTAATATATCTCATTTTGGAATCCACAGCAAGTCTCAGTTTTGAAGGTGC

Transcript

ctg1049-2.10-1

Protein

Gene family

Gene family	Subfamily
-	-

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF00312	Ribosomal_S15	Ribosomal protein S15	Domain	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR000589	Family	Small ribosomal subunit protein uS15	Interproscan
IPR009068	Homologous_superfamily	uS15/NS1, RNA-binding domain superfamily	Interproscan
IPR052137	Family	Universal small ribosomal subunit uS15	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR46685	28S RIBOSOMAL PROTEIN S15, MITOCHONDRIAL	Interproscan

Gene Ontology

GO terms	Category	Description	Source
GO:0003723	Molecular Function	RNA binding	Interproscan
GO:0003735	Molecular Function	structural constituent of ribosome	Interproscan
GO:0005763	Cellular Component	mitochondrial small ribosomal subunit	Interproscan
GO:0005840	Cellular Component	ribosome	Interproscan
GO:0006412	Biological Process	translation	Interproscan
GO:0032543	Biological Process	mitochondrial translation	Interproscan

KEGG pathway

KO	Enzyme	Enzyme ID	pathway	mapID	Source
-	-	-	-	-	-

Expression pattern

1. Expression trend for ctg1049-2.10-1 global RNA-seq network