Gene detail

Detailed information of ctg1068-4.2-1 in Gigantopelta aegis Gene info

Gene ID	Annotation	Chromosome	Start	End	Strand
ctg1068-4.2-1	BARDET-BIEDL SYNDROME 12 PROTEIN	chr15	1739280	1764071	+

Gene Structure

More details in Jbrowse Sequence

CDS

ctg1068-4.2-1

AATAGAAGACGACGTTTTCATTAGTTACGAATGCAAACGCTCGTTAAATGTCGTCGCAGTGTACGAGCTTTATGTCAGGTCCAGATGCCGCCGTTCACTTGGCCTCGCTGGTGATGCCCCTTATTGCTAATAACAATGGTGTCAAGTGTATTGTGGATTCTAACCAAGATGCAGTTCTGGTCAAGGACGTGGCAATGTTGCTAAGGTTACTCGATATAGAGCACCCTGTTGGTCAGATGATAGAATCAGTGTGTTCGTCACATAAGAATCAACATGGTGGAGGCGTTAAGACGTTGCTGGCGATGATTGGTCTTTTCACCAAAGCTGTTGTCACTCTCCGAGATCAGGGAGTCTTCATCAGCGACATTTTATCTATGATGCGTTCAGCAGTCGAAAAGTGTATTCTTTTATGTGAACAGCTGAAAATATCTGTTGATGTACAAGAAGACACACATATCACAGAGGCATGTGAACATGGCAGATATAATTCTGACATAGACAGACTTAGAAAACATAGAGAAACATCTGAACATAGACTTGGATGTGAGCATGGACAATCATCTGAACATCGACAGACATCTGAACATAGGCAAACATCTGAATATACACATGGACCTAAGCAGAGACAAACATCTGAACATAGACAAATGTCTGAACATAGACAAACGTCTGGACATATACTTGGATCTGAGAATAGACTAACATCTGAATATCAACTGACATCTGAACTTAGACAAACATCTGAACATCGAGAGACATCTGAACTTAGCCTCACATCTGAATGTAGACTTGGTTCTGAACAGAAATTATGTGAGTCAGCCATTATCAGTGGGTTGATATCAACAGTTACTACAACAGGTTCTCCTGGTACTAACACGTGTTGTTTGAAGGAGAGTCCTGCTCAGTCTGACTGTACAGACATTACGTTAAACCCAGGTGAAACAGAATATCAGTCTGGAAAGAACAAGAACAGTGTTGTTGCTGGACAGTCTGCAACACATGAGGCCAGAAATTTGGTACACAGTGGCGAAAGTATTCAGACCAATTCTGATATATTTAATCGTGGTGACAACCCAACCACAAGAATTCCAGATGAGTTCAGTCACAAATACTGGCCAGCTGTATCTGATGAAAGATCTAAAACAGAGATAAAACCAGAAGCTAGTTACGATGATGATGATGTTGCCTGGTTTTTTGAAGATCCAGTAGAAACAGATAGTGACAGTGGACTTGGAGTGAAAGTGGAAACTGCAGCAGACGTGAAGAATTTACCTACTACTTCCAAAACTGAAGATTTCCTTGTTACAAGTTTGCGAGATACCCAGCTGTATGATTCAGATTTTTATGACTGTTTTGATGATCTTTCAGTGAATAGTTCAATAAAATGTTCCATTCTTGACGTGCAGGAACCCAGACATAGTAAGCCAGAGGCTAGTAAGAGTCATTGGTTGAAATGCAGCCAATCAGATTGTGACAACACTCATTGGTTGGAATCTAAGAAGAGCAGCAGTCATTGGTTGAAAGGTGACCAATCAGACAGTGTTAACAATCAATTTACCAATCCTGACATGTTCAATTTGAAGAAGTTGAATAATGTGTTAAAAGCGTTTAGTACCAAATCTTGTTCTCTGAATTCTAAGAGAGTTATGAATTGTAGCAGACATTTTAAGACCATTGCTACTGCTGTGGATGGCATGAAGGAAGATAAGTTGCTTAGCAACAGTGTTGAGAAAGTTGCTTTTGAGAGAGCTGAATACTGTATGCCATCAGCAAACTCATGTCCTAAATCATCAACACACTCAGGTTTTATGTCAATTGATTCATATCCAAAAGGTTCATGTTCTAAATCATCAACAGATTCAGGTTTCATGTCAATTGATTCATGTCCTAAATCATCAACTGATCACTGTTCTGTATCATCAACATATCCATGTCCTAAATCATCAACAGATTTATGTTTTGTGTCAATCAATTCATATCTTAAATCATCAACTGATTCATGTCCTATATCATCGACTGATCACTGTCCTGTATCATCAACTGATTCTTGTCCTCAATCATCAACTAATTCAGGTCCTAAATTGTCCACTGATTTGTGTTCTAAACCATCAACTGATTCAGATGCTGAACATGTTTTAAGACCAGGCAAAAACCAACACAAAAGGCATCCTGGTTTATCTCAAAGCAGATACTTCAGAGAATTCACTGACACAATTGTTGGAAACGTTTTGGACCAACAGCATTACACCTTGCAACATGATGAAGATGTGACTTCAGAATTTCAAACTAATCCTCCAAATTTAAAAAACTTCCATTCACTTACTCACTCTTGCTATGAGACTGTAACAGAACATTATGCTAATAAACAAGACTATCATCAATCAGATAGGAAAAACAAGATGATGATGTTTTCTAGAACTGAAGAACAATTAAGCTGTGATCATCAGATGACAGGTGGTCAGGTTGGATCAGGGTCCAGTAAAGACTCCTCACTGGACGTGGCAGAGGCAGCAAGAGGGTTAAGTCATGGACTCCATGACACCATGCAGTTTGTCCTGGAAGCTTTTCACAACCAGAAAACAAGAAAAGGAGAACAGCAGTATAGGACACAGTTGAATGTGAAACTCCTGTACAGCTGCGTGGTTTGTGGTCCCAGTGTTCAACACTCGCAGCTTGTCGATGGACTTATTCTGTATACAGAGTGGGAGCAACTCGACTGCATTCACAGAAAATCTAAATCACCTCTTAATGTGCTGCTGGTAAATGGTGATGTGAGTTTGACGTTCCGACACACTGGTTTCGTATCACCTGCTCAGATTTCCACCATTGCAAGCAAACCATCTTTACAGTTAAACAGACCAAGTGACAAATTCATCACAGAGTGTCTCCAGGTACTAAAACAGCTTTCGGTGGATTTGGTATTGACAAAAGGGAAAGTTGACTCGAGTGTTAAACAGGCAATGCTGTCATGTGACGTGGTTGTCATGGAGATGGTAGAATATCGAGTTCTGGAGGTTCTTCAACTTGCCAGCAACACAAGCTGTGTCACATACATTACAGAGGCCACAAAGAGTCACGTGTGTGCCGACATGTATGTTGACGTATTCACAACTGACTGGATGGACAAACGTTATGCAGACGGCAGTCAGCCATGTTTGATTTCTCTGCGAAATTCACACAGACTCGTCCAGACGTTCGTTTCGTGTCATCCTAGCCAGCAAGCGGCAGAGTTACATGAGCAGGAGTTTTGGCAGTGTGCCAACAGACTTCATGACGCTTTGCTGGACAGGGCAGTTCTACCAGGAGGTGGGGTGGTGGAGGAGAGGTGTGCACGTCACCTCATGTCTCTAGATGACACACGGTGTATTCCAGAAAATCAAGATCTCTTGTACAGAACAGTTCGCGAGTGTGTTGCTGAAAGCTTTCTGGATTTTTTCCATACGGTACGGAAAAATACTGGATACGTGCATGGTGGGAACAAAAGTGATACTAACTTTGAAGATTCCAACAGATTCTTTTCCTGTGTTGACCCTGGTTGTCAGCAGCCGTTTGATAATTTCCACACCAAGATGGCTGCCTGGAGAAGAGCCATGGATACAGTATCTATAATATTCCAGATTAATGCTCTTGTGGTGACTGGAATCTGACAGTGTCACACACTCTACACAGACTTAGTACAGTATCTATAATATTTCAGATCAGTAATCTTGTGGTGACTGGAATATAACAATTAATATCACACACTCCTCACAGACTCAGTATTGTTTTGAAAATAAATACTTGTTCACTTC

Transcript

ctg1068-4.2-1

Protein

Gene family

Gene family	Subfamily
-	-

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF00118	Cpn60_TCP1	TCP-1/cpn60 chaperonin family	Family	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR002423	Family	Chaperonin Cpn60/GroEL/TCP-1 family	Interproscan
IPR027409	Homologous_superfamily	GroEL-like apical domain superfamily	Interproscan
IPR027410	Homologous_superfamily	TCP-1-like chaperonin intermediate domain superfamily	Interproscan
IPR027413	Homologous_superfamily	GroEL-like equatorial domain superfamily	Interproscan
IPR042984	Family	Bardet-Biedl syndrome 12 protein	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR46883	BARDET-BIEDL SYNDROME 12 PROTEIN	Interproscan

Gene Ontology

GO terms	Category	Description	Source
GO:0005524	Molecular Function	ATP binding	Interproscan
GO:0045494	Biological Process	photoreceptor cell maintenance	Interproscan
GO:0051131	Biological Process	chaperone-mediated protein complex assembly	Interproscan

KEGG pathway

KO	Enzyme	Enzyme ID	pathway	mapID	Source
-	-	-	-	-	-

Expression pattern

1. Expression trend for ctg1068-4.2-1 global RNA-seq network