Detailed information of ctg1224-1.0-1 in Gigantopelta aegis Gene info
Gene IDAnnotationChromosomeStartEndStrand
ctg1224-1.0-1E3 UBIQUITIN-PROTEIN LIGASE UHRF-RELATEDctg1224_pilon_pilon:::debris6531776741-

Gene Structure
More details in Jbrowse Sequence
CDS
Transcript
Protein

Gene family
Gene familySubfamily
Ubiquitin FamilyE3|E3 activity RING|RING
Ubiquitin FamilyE3|E3 activity RING|U-box

Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF02182SAD_SRASAD/SRA domainDomainInterproscan
PF12148TTDTandem tudor domain within UHRF1DomainInterproscan
PF13445zf-RING_UBOXRING-type zinc-fingerDomainInterproscan

InterPro
InterPro termTypeDescriptionSource
IPR001841DomainZinc finger, RING-typeInterproscan
IPR003105DomainSRA-YDGInterproscan
IPR013083Homologous_superfamilyZinc finger, RING/FYVE/PHD-typeInterproscan
IPR015947Homologous_superfamilyPUA-like superfamilyInterproscan
IPR017907Conserved_siteZinc finger, RING-type, conserved siteInterproscan
IPR021991DomainUHRF1, tandem tudor domainInterproscan
IPR027370DomainZinc finger, RING-type, eukaryoticInterproscan
IPR029071Homologous_superfamilyUbiquitin-like domain superfamilyInterproscan
IPR036987Homologous_superfamilySRA-YDG superfamilyInterproscan
IPR045134FamilyUHRF1/2-likeInterproscan

PANTHER
PANTHER termDescriptionSource
PTHR14140E3 UBIQUITIN-PROTEIN LIGASE UHRF-RELATEDInterproscan

Gene Ontology
GO termsCategoryDescriptionSource
GO:0010216Biological Processobsolete negative regulation of gene expression via chromosomal DNA cytosine methylationInterproscan
GO:0016567Biological Processprotein ubiquitinationInterproscan
GO:0061630Molecular Functionubiquitin protein ligase activityInterproscan

KEGG pathway
KOEnzymeEnzyme IDpathwaymapIDSource
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Expression pattern
 1. Expression trend for ctg1224-1.0-1 global RNA-seq network
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