Gene detail

Detailed information of ctg352-4.6-1 in Gigantopelta aegis Gene info

Gene ID	Annotation	Chromosome	Start	End	Strand
ctg352-4.6-1	SOLUTE CARRIER PROTEIN FAMILY 11 MEMBER	chr9	60648451	60663477	+

Gene Structure

More details in Jbrowse Sequence

CDS

ctg352-4.6-1

AAAACAGACAGAGGTATTGAAGGGTCTGTTCTTCCCATGGTGCGAAGGCTGCGGGTCAAAGCAGCTTCTCCAGGCTGTCGGCATCATCGGAGCCATCATCATGCCTCACAACATCTACCTACATTCAGCCCTCGTCAAGAGGGTTTCTATGGGAGAAGTGCTGCAGAAATTCTCAGTGGCCAATGCCCTAGGATTTCGGTACACACTCTGTCTGCTCTTTGCAAACATGGCGAGCACTAGTAGTTCAATGTCGCGCAGGTCTTATACCGCTGCGTTTAAACTGAAAGTCATTTCCGTTGCTGAAGAAAAAGGCAAGCATCATGCTTCAAAATTGTTTGGTGTCTACCGCAAACGGGTCCAAGATTGGTGTAAATCGAAAGAACACCTTAAATCGACAAAGAAAACAGAAAAAAGAAAGCCAGGCGCCGGAAGACCAGTTAAGTACACTGATATTGAAAACACTTTGCTGTCTTGGTTTAATGAGCGTCGGTCGGCGGGTGTGCACGTTATGGGTAAGGCACTCAAATATGAAGCCTTGCGACTTCATAAGATTAATGGCAACCAGTCATTCAAAGCTTCAATGGGTTGGTTTTCAAAATTTAAGAAACGTCACAGGTTTACTTTTCGGTGCACAACCCACGTGTCTCAGCATGTTGCTGCTATAACTGACGATAAAGTGGACAAATTTCTACGTTTCGTTATCAAATTAAGGAAGCTTTGCGGATATGATGACAGAGATATTATTAATATGGACGAAACCCCTGTTTGGCTAGAAATGCCCGGAAAATCGACACTCAATGTAAAAGGTGTTCATGAAGTTGCTATGTCGTCGACGGGCCACGAGAAGCAGCGCATTACAGTGACATTAGATAAGTTTCACTTTGATGACAATTTACCCATTGCTTAGAGTTATAGCCCTTGAACTTATGAGATAAGAAAATGTGTTTGGGGGGGGCCCTGTAGGGGTCATGTATTGCTTTAGCAGTACTCTCAGAATGCTTGTTATATTTTACAATTGTAATAATTTTGTTGTAGATTTTGTAAAATTCTTATTCTTATTTTGCAGACTTCAAATGAAGAAGTGACAGTGGATCTCTACAGAGGGGGAGTTTTTCTGGGTTGTCAGTTTGGTCCAGCTGCAATGTACATCTGGGCAGTAGGCCTTTTTGCAGCAGGTCAAAGTTCAACCATGACTGGAACGTACACTGGCCAGTTTGTAATGGAGGGTTTCTTCAATCTCCGGTGGAAAAGATGGCAACGGGTTTTACTGACACGAACTATCGCCATCTTGCCAACTGTTCTGATCGCAGCGTTTAATGGAATAGACAACCTCACAAAGATGAACGATTTGCTTAATGTACTCATGAGTCTACAACTTCCGTTTGCTCTCTTCCCCATCCTGGCCTTCACCAGTTCCAAAGCTATCATGAATGATTTTGTCAACGGAAAATTAATGAAAATCATATCGAGTCTGTTGACCCTTGGTGTGATTTCCATCAACATATATTTTGTTGTTGTTTACATCCAAGATCTACCACAACACTGGGCGATATACTTTGGAGTGGCTGTTGTCATGTTCTTTTACATAGCATTTGTTATCTACTTGGCTATTTTCTGTTTTGCAGTAGCAGGTATTGCGAGTGTTAGTGAATGTAAACCATTTGGTTTGAATTTTGGACCTAAGTATGTTTTAGAAACAAATAACCGTAACCAAGACGTGAATACTGAACTGACAGAAAGTACGAGTACGCTGGATGACAATAACACTGAAGCAGACTACAGATCACATCTTTGACCTCAACACTCTGTACAACAGATAACCACAGTGATGGGTTCACTGTGGAAGCCATCTTGCCATTAGGAGATAAACACGAAGATTATTCACAATATTTTGATCCTGAAGTCTTATAAATGTAATAAGGTACTTTTTTTTTTTTTTTTTTTTTTCTTAAACATTTTTATTTTTATGGATACATCTCAACATGCTCACAGGAAAGAGTGGAAGAGATTATCAGTGGCAGATCCAGAAAATCCATTTAGCCCAATGACATGAGGCGGAATGCCAATGGAACTTTGGAGGGGATGAAAATTAATATATAATAAAATTATAACTGTAGCAAAATTTAGGGGGCTTACCTAGATCCGCCTCTGATTATGGATATTAAGGAGCTACTTATAATTTGGTAGATCCATATATCAACTGATATTGGGCATCAACAAATCACCAATGGAAGTGATTTAACCTTTATGAGATCAACCAAAAGATTAATTATTTAGCCTATTTTTTTATTAAAGGGACAGACCCTAGTTTTTAAATGCTACGGCACATTTTTCACTGTTAGAGCCGTTTATGATCACTGAAATCAAACATTACTTACATTTTATTGTTTAGATTATCC

Transcript

ctg352-4.6-1

Protein

Gene family

Gene family	Subfamily
-	-

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF01566	Nramp	Natural resistance-associated macrophage protein-like	Family	Interproscan
PF03221	HTH_Tnp_Tc5	Tc5 transposase DNA-binding domain	Domain	Interproscan
PF09607	BrkDBD	Brinker DNA-binding domain	Domain	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR001046	Family	NRAMP family	Interproscan
IPR006600	Domain	HTH CenpB-type DNA-binding domain	Interproscan
IPR009057	Homologous_superfamily	Homeobox-like domain superfamily	Interproscan
IPR018586	Domain	Brinker DNA-binding domain	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR11706	SOLUTE CARRIER PROTEIN FAMILY 11 MEMBER	Interproscan

Gene Ontology

GO terms	Category	Description	Source
GO:0005381	Molecular Function	iron ion transmembrane transporter activity	Interproscan
GO:0005384	Molecular Function	manganese ion transmembrane transporter activity	Interproscan
GO:0005886	Cellular Component	plasma membrane	Interproscan
GO:0015086	Molecular Function	cadmium ion transmembrane transporter activity	Interproscan
GO:0016020	Cellular Component	membrane	Interproscan
GO:0030001	Biological Process	metal ion transport	Interproscan
GO:0046873	Molecular Function	metal ion transmembrane transporter activity	Interproscan

KEGG pathway

KO	Enzyme	Enzyme ID	pathway	mapID	Source
-	-	-	-	-	-

Expression pattern

1. Expression trend for ctg352-4.6-1 global RNA-seq network