Detailed information of gene02113.t1 in Actinoscyphia liui

Genomic Location: chr1:33077247...33085832
NR annotation: XP_020901576.1, E3 ubiquitin-protein ligase AMFR [Exaiptasia diaphana]


 Gene Structure
More details in Jbrowse  Sequence
CDS
Transcript
Protein
 Uniprot
Uniprot termDescription
F1QB30E3 ubiquitin-protein ligase AMFR OS=Danio rerio OX=7955 GN=amfra PE=1 SV=1
Q9R049E3 ubiquitin-protein ligase AMFR OS=Mus musculus OX=10090 GN=Amfr PE=1 SV=2
Q9UKV5E3 ubiquitin-protein ligase AMFR OS=Homo sapiens OX=9606 GN=AMFR PE=1 SV=2
 Gene family
Gene familySubfamily
Ubiquitin FamilyUBD|Alpha-Helix|CUE
Ubiquitin FamilyE3|E3 activity RING|RING

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF13639zf-RING_2Ring finger domainDomainInterproscan
PF02845CUECUE domainDomainInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR001841DomainZinc finger, RING-typeInterproscan
IPR003892DomainUbiquitin system component CUEInterproscan
IPR013083Homologous_superfamilyZinc finger, RING/FYVE/PHD-typeInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR15067E3 UBIQUITIN-PROTEIN LIGASE RNF8Interproscan

 Gene Ontology
GO termsCategoryDescriptionSource
GO:0000151Cellular Componentubiquitin ligase complexInterproscan
GO:0005783Cellular Componentendoplasmic reticulumInterproscan
GO:0005829Cellular ComponentcytosolInterproscan
GO:0006511Biological Processubiquitin-dependent protein catabolic processInterproscan
GO:0016567Biological Processprotein ubiquitinationInterproscan
GO:0030968Biological Processendoplasmic reticulum unfolded protein responseInterproscan
GO:0061630Molecular Functionubiquitin protein ligase activityInterproscan
GO:0070936Biological Processprotein K48-linked ubiquitinationInterproscan
GO:0043130Molecular Functionubiquitin bindingInterproscan

 KEGG pathway
KOEnzymeEnzyme IDpathwaymapIDSource
K10636AMFR, GP78; E3 ubiquitin-protein ligase AMFREC:2.3.2.36
Ubiquitin systemko04121deepkoala

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