Detailed information of gene02449.t1 in Actinoscyphia liui

Genomic Location: chr1:37346917...37356553
NR annotation: XP_031552643.1, uncharacterized protein LOC116289852 [Actinia tenebrosa]


 Gene Structure
More details in Jbrowse  Sequence
CDS
Transcript
Protein
 Uniprot
Uniprot termDescription
Q3UIR3E3 ubiquitin-protein ligase DTX3L OS=Mus musculus OX=10090 GN=Dtx3l PE=1 SV=1
Q8TDB6E3 ubiquitin-protein ligase DTX3L OS=Homo sapiens OX=9606 GN=DTX3L PE=1 SV=1
Q8N9I9Probable E3 ubiquitin-protein ligase DTX3 OS=Homo sapiens OX=9606 GN=DTX3 PE=1 SV=2
 Gene family
Gene familySubfamily
Ubiquitin FamilyE3|E3 activity RING|RING

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF18102DTCDeltex C-terminal domainDomainInterproscan
PF01661MacroMacro domainDomainInterproscan
PF13923zf-C3HC4_2Zinc finger, C3HC4 type (RING finger)DomainInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR039396DomainDeltex, C-terminalInterproscan
IPR039398FamilyDeltex familyInterproscan
IPR013083Homologous_superfamilyZinc finger, RING/FYVE/PHD-typeInterproscan
IPR002589DomainMacro domainInterproscan
IPR012677Homologous_superfamilyNucleotide-binding alpha-beta plait domain superfamilyInterproscan
IPR039399Homologous_superfamilyDeltex, C-terminal domain superfamilyInterproscan
IPR043472Homologous_superfamilyMacro domain-likeInterproscan
IPR017907Conserved_siteZinc finger, RING-type, conserved siteInterproscan
IPR001841DomainZinc finger, RING-typeInterproscan
IPR035979Homologous_superfamilyRNA-binding domain superfamilyInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR12622DELTEX-RELATEDInterproscan

 Gene Ontology
GO termsCategoryDescriptionSource
GO:0005654Cellular ComponentnucleoplasmInterproscan
GO:0007219Biological ProcessNotch signaling pathwayInterproscan
GO:0016567Biological Processprotein ubiquitinationInterproscan
GO:0061630Molecular Functionubiquitin protein ligase activityInterproscan
GO:0003676Molecular Functionnucleic acid bindingInterproscan

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