Detailed information of gene02496.t1 in Actinoscyphia liui

Genomic Location: chr1:37860181...37863598
NR annotation: XP_020906467.1, RING finger protein 166 [Exaiptasia diaphana]


 Gene Structure
More details in Jbrowse  Sequence
CDS
Transcript
Protein
 Uniprot
Uniprot termDescription
Q6J2U6E3 ubiquitin-protein ligase RNF114 OS=Rattus norvegicus OX=10116 GN=Rnf114 PE=2 SV=1
Q9ET26E3 ubiquitin-protein ligase RNF114 OS=Mus musculus OX=10090 GN=Rnf114 PE=1 SV=2
Q3U9F6E3 ubiquitin-protein ligase RNF166 OS=Mus musculus OX=10090 GN=Rnf166 PE=2 SV=1
 Gene family
Gene familySubfamily
Ubiquitin FamilyE3|E3 activity RING|RING
Ubiquitin FamilyE3|E3 activity RING|U-box
Ubiquitin FamilyUBD|ZnF|UBZ

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF05605zf-Di19Drought induced 19 protein (Di19), zinc-bindingDomainInterproscan
PF13445zf-RING_UBOXRING-type zinc-fingerDomainInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR008598DomainDrought induced 19 protein type, zinc-binding domainInterproscan
IPR017907Conserved_siteZinc finger, RING-type, conserved siteInterproscan
IPR001841DomainZinc finger, RING-typeInterproscan
IPR027370DomainZinc finger, RING-type, eukaryoticInterproscan
IPR013083Homologous_superfamilyZinc finger, RING/FYVE/PHD-typeInterproscan
IPR051438FamilyRNF E3 ubiquitin-protein ligaseInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR46016ZINC FINGER, RING/FYVE/PHD-TYPEInterproscan

 Gene Ontology
GO termsCategoryDescriptionSource
GO:0000209Biological Processprotein polyubiquitinationInterproscan
GO:0006511Biological Processubiquitin-dependent protein catabolic processInterproscan
GO:0061630Molecular Functionubiquitin protein ligase activityInterproscan

 KEGG pathway
KOEnzymeEnzyme IDpathwaymapIDSource
K17044RNF166; E3 ubiquitin-protein ligase RNF166EC:2.3.2.27
Ubiquitin systemko04121deepkoala

TOP