Detailed information of gene03134.t1 in Actinoscyphia liui

Genomic Location: chr1:47451961...47454770
NR annotation: XP_020917675.1, RNA-binding protein MEX3B [Exaiptasia diaphana]


 Gene Structure
More details in Jbrowse  Sequence
CDS
Transcript
Protein
 Uniprot
Uniprot termDescription
A1L3F4RNA-binding protein MEX3B OS=Xenopus laevis OX=8355 GN=mex3b PE=2 SV=1
Q05A36RNA-binding E3 ubiquitin-protein ligase MEX3C OS=Mus musculus OX=10090 GN=Mex3c PE=2 SV=2
Q5U5Q3RNA-binding E3 ubiquitin-protein ligase MEX3C OS=Homo sapiens OX=9606 GN=MEX3C PE=1 SV=3

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF13920zf-C3HC4_3Zinc finger, C3HC4 type (RING finger)DomainInterproscan
PF00013KH_1KH domainDomainInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR036612Homologous_superfamilyK Homology domain, type 1 superfamilyInterproscan
IPR047226DomainRNA-binding protein MEX-3, second type I KH domainInterproscan
IPR001841DomainZinc finger, RING-typeInterproscan
IPR004087DomainK Homology domainInterproscan
IPR004088DomainK Homology domain, type 1Interproscan
IPR013083Homologous_superfamilyZinc finger, RING/FYVE/PHD-typeInterproscan
IPR047228DomainRNA-binding protein MEX-3, first type I KH domainInterproscan
IPR047227FamilyRNA-binding protein MEX3Interproscan

 PANTHER
PANTHER termDescriptionSource
PTHR23285RING FINGER AND KH DOMAIN CONTAINING PROTEIN 1Interproscan

 Gene Ontology
GO termsCategoryDescriptionSource
GO:0003723Molecular FunctionRNA bindingInterproscan
GO:0003676Molecular Functionnucleic acid bindingInterproscan

 KEGG pathway
KOEnzymeEnzyme IDpathwaymapIDSource
K15686MEX3, RKHD; RNA-binding protein MEX3EC:2.3.2.27
Ubiquitin systemko04121deepkoala

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