Detailed information of gene03137.t1 in Actinoscyphia liui

Genomic Location: chr1:47506475...47514343
NR annotation: XP_020898246.1, U3 small nucleolar RNA-associated protein 15 homolog [Exaiptasia diaphana]


 Gene Structure
More details in Jbrowse  Sequence
CDS
Transcript
Protein
 Uniprot
Uniprot termDescription
Q7ZXZ2U3 small nucleolar RNA-associated protein 15 homolog OS=Xenopus laevis OX=8355 GN=utp15 PE=2 SV=1
Q5XGE2U3 small nucleolar RNA-associated protein 15 homolog OS=Xenopus tropicalis OX=8364 GN=utp15 PE=2 SV=1
Q5F3D7U3 small nucleolar RNA-associated protein 15 homolog OS=Gallus gallus OX=9031 GN=UTP15 PE=2 SV=1
 Gene family
Gene familySubfamily
Ubiquitin FamilyUBD|Other|Beta-prp
Ubiquitin FamilyE3|E3 adaptor Cullin RING|DWD

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF00400WD40WD domain, G-beta repeatRepeatInterproscan
PF09384UTP15_CUTP15 C terminalFamilyInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR015943Homologous_superfamilyWD40/YVTN repeat-like-containing domain superfamilyInterproscan
IPR001680RepeatWD40 repeatInterproscan
IPR036322Homologous_superfamilyWD40-repeat-containing domain superfamilyInterproscan
IPR020472RepeatG-protein beta WD-40 repeatInterproscan
IPR018983DomainU3 small nucleolar RNA-associated protein 15, C-terminalInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR19924UTP15 U3 SMALL NUCLEOLAR RNA-ASSOCIATED PROTEIN 15 FAMILY MEMBERInterproscan

 Gene Ontology
GO termsCategoryDescriptionSource
GO:0005515Molecular Functionprotein bindingInterproscan
GO:0005730Cellular ComponentnucleolusInterproscan
GO:0006364Biological ProcessrRNA processingInterproscan
GO:0045943Biological Processpositive regulation of transcription by RNA polymerase IInterproscan

 KEGG pathway
KOEnzymeEnzyme IDpathwaymapIDSource
K14549UTP15; U3 small nucleolar RNA-associated protein 15-Ribosome biogenesisko03009deepkoala

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