Detailed information of gene03306.t1 in Actinoscyphia liui

Genomic Location: chr1:50828796...50834517
NR annotation: KXJ26003.1, Retinal homeobox protein Rx1 [Exaiptasia diaphana]


 Gene Structure
More details in Jbrowse  Sequence
CDS
Transcript
Protein
 Uniprot
Uniprot termDescription
Q9IAL2Visual system homeobox 1 OS=Gallus gallus OX=9031 GN=VSX1 PE=2 SV=1
Q91V10Visual system homeobox 1 OS=Mus musculus OX=10090 GN=Vsx1 PE=1 SV=1
Q90277Visual system homeobox 1 OS=Carassius auratus OX=7957 GN=vsx1 PE=1 SV=1
 Gene family
Gene familySubfamily
Transcription Factors FamilyHomeobox

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF00046HomeodomainHomeodomainDomainInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR017970Conserved_siteHomeobox, conserved siteInterproscan
IPR001356DomainHomeobox domainInterproscan
IPR009057Homologous_superfamilyHomeobox-like domain superfamilyInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR45793HOMEOBOX PROTEINInterproscan

 Gene Ontology
GO termsCategoryDescriptionSource
GO:0000981Molecular FunctionDNA-binding transcription factor activity, RNA polymerase II-specificInterproscan
GO:0006355Biological Processregulation of DNA-templated transcriptionInterproscan
GO:0000978Molecular FunctionRNA polymerase II cis-regulatory region sequence-specific DNA bindingInterproscan
GO:0005634Cellular ComponentnucleusInterproscan
GO:0006357Biological Processregulation of transcription by RNA polymerase IIInterproscan
GO:0003677Molecular FunctionDNA bindingInterproscan

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