Detailed information of gene07438.t1 in Actinoscyphia liui

Genomic Location: chr2:47668400...47773224
NR annotation: KXJ23371.1, E3 ubiquitin-protein ligase RNF213 [Exaiptasia diaphana]


 Gene Structure
More details in Jbrowse  Sequence
CDS
Transcript
Protein
 Uniprot
Uniprot termDescription
A0A0R4IBK5E3 ubiquitin-protein ligase rnf213-alpha OS=Danio rerio OX=7955 GN=rnf213a PE=3 SV=1
E9Q555E3 ubiquitin-protein ligase RNF213 OS=Mus musculus OX=10090 GN=Rnf213 PE=1 SV=3
Q63HN8E3 ubiquitin-protein ligase RNF213 OS=Homo sapiens OX=9606 GN=RNF213 PE=1 SV=3

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF07728AAA_5AAA domain (dynein-related subfamily)DomainInterproscan
PF00097zf-C3HC4Zinc finger, C3HC4 type (RING finger)DomainInterproscan
PF20173ZnF_RZ-typeRZ type zinc finger domainDomainInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR027417Homologous_superfamilyP-loop containing nucleoside triphosphate hydrolaseInterproscan
IPR011704DomainATPase, dynein-related, AAA domainInterproscan
IPR001841DomainZinc finger, RING-typeInterproscan
IPR003593DomainAAA+ ATPase domainInterproscan
IPR046439DomainZinc finger, RZ-typeInterproscan
IPR018957DomainZinc finger, C3HC4 RING-typeInterproscan
IPR031248FamilyE3 ubiquitin-protein ligase RNF213Interproscan
IPR013083Homologous_superfamilyZinc finger, RING/FYVE/PHD-typeInterproscan
IPR017907Conserved_siteZinc finger, RING-type, conserved siteInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR22605UNCHARACTERIZEDInterproscan

 Gene Ontology
GO termsCategoryDescriptionSource
GO:0005524Molecular FunctionATP bindingInterproscan
GO:0016887Molecular FunctionATP hydrolysis activityInterproscan
GO:0046872Molecular Functionmetal ion bindingInterproscan
GO:0004842Molecular Functionubiquitin-protein transferase activityInterproscan

 KEGG pathway
KOEnzymeEnzyme IDpathwaymapIDSource
K22754RNF213; E3 ubiquitin-protein ligase RNF213EC:2.3.2.27
Ubiquitin systemko04121deepkoala

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