Detailed information of gene07975.t1 in Actinoscyphia liui

Genomic Location: chr2:56781266...56794402
NR annotation: XP_031569634.1, probable E3 ubiquitin-protein ligase RNF144A-B [Actinia tenebrosa]


 Gene Structure
More details in Jbrowse  Sequence
CDS
Transcript
Protein
 Uniprot
Uniprot termDescription
P50876E3 ubiquitin-protein ligase RNF144A OS=Homo sapiens OX=9606 GN=RNF144A PE=1 SV=2
Q925F3E3 ubiquitin-protein ligase RNF144A OS=Mus musculus OX=10090 GN=Rnf144a PE=1 SV=1
Q5RFV4Probable E3 ubiquitin-protein ligase RNF144A-A OS=Danio rerio OX=7955 GN=rnf144aa PE=3 SV=1

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF01485IBRIBR domain, a half RING-finger domainDomainInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR002867DomainIBR domainInterproscan
IPR031127FamilyE3 ubiquitin ligase RBR familyInterproscan
IPR013083Homologous_superfamilyZinc finger, RING/FYVE/PHD-typeInterproscan
IPR044066DomainTRIAD supradomainInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR11685RBR FAMILY RING FINGER AND IBR DOMAIN-CONTAININGInterproscan

 Gene Ontology
GO termsCategoryDescriptionSource
GO:0008270Molecular Functionzinc ion bindingInterproscan
GO:0000151Cellular Componentubiquitin ligase complexInterproscan
GO:0000209Biological Processprotein polyubiquitinationInterproscan
GO:0004842Molecular Functionubiquitin-protein transferase activityInterproscan
GO:0005737Cellular ComponentcytoplasmInterproscan
GO:0006511Biological Processubiquitin-dependent protein catabolic processInterproscan
GO:0016567Biological Processprotein ubiquitinationInterproscan
GO:0031624Molecular Functionubiquitin conjugating enzyme bindingInterproscan
GO:0032436Biological Processpositive regulation of proteasomal ubiquitin-dependent protein catabolic processInterproscan
GO:0061630Molecular Functionubiquitin protein ligase activityInterproscan

 KEGG pathway
KOEnzymeEnzyme IDpathwaymapIDSource
K11975RNF144; E3 ubiquitin-protein ligase RNF144EC:2.3.2.31
Ubiquitin systemko04121deepkoala

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