Detailed information of gene08517.t1 in Actinoscyphia liui

Genomic Location: chr11:10775138...10795638
NR annotation: XP_031572908.1, apoptotic protease-activating factor 1-like [Actinia tenebrosa]


 Gene Structure
More details in Jbrowse  Sequence
CDS
Transcript
Protein
 Uniprot
Uniprot termDescription
Q9I9H8Apoptotic protease-activating factor 1 OS=Danio rerio OX=7955 GN=apaf1 PE=2 SV=1
O14727Apoptotic protease-activating factor 1 OS=Homo sapiens OX=9606 GN=APAF1 PE=1 SV=2
Q9EPV5Apoptotic protease-activating factor 1 OS=Rattus norvegicus OX=10116 GN=Apaf1 PE=1 SV=1
 Gene family
Gene familySubfamily
Ubiquitin FamilyUBD|Other|Beta-prp
Ubiquitin FamilyE3|E3 adaptor Cullin RING|CDC20
Ubiquitin FamilyE3|E3 adaptor Cullin RING|DWD

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF00931NB-ARCNB-ARC domainDomainInterproscan
PF00400WD40WD domain, G-beta repeatRepeatInterproscan
PF17908APAF1_CAPAF-1 helical domainDomainInterproscan
PF21296APAF-1-like_WHDApoptotic protease-activating factor 1-like, winged-helix domainDomainInterproscan
PF00619CARDCaspase recruitment domainDomainInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR001680RepeatWD40 repeatInterproscan
IPR019775Conserved_siteWD40 repeat, conserved siteInterproscan
IPR011029Homologous_superfamilyDeath-like domain superfamilyInterproscan
IPR002182DomainNB-ARCInterproscan
IPR041452DomainAPAF-1 helical domainInterproscan
IPR027417Homologous_superfamilyP-loop containing nucleoside triphosphate hydrolaseInterproscan
IPR036388Homologous_superfamilyWinged helix-like DNA-binding domain superfamilyInterproscan
IPR015943Homologous_superfamilyWD40/YVTN repeat-like-containing domain superfamilyInterproscan
IPR036322Homologous_superfamilyWD40-repeat-containing domain superfamilyInterproscan
IPR001315DomainCARD domainInterproscan
IPR048975DomainApoptotic protease-activating factor 1, winged-helix domainInterproscan
IPR042197Homologous_superfamilyApoptotic protease-activating factors, helical domainInterproscan
IPR020472RepeatG-protein beta WD-40 repeatInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR22845APOPTOTIC PROTEASE-ACTIVATING FACTOR 1Interproscan

 Gene Ontology
GO termsCategoryDescriptionSource
GO:0005515Molecular Functionprotein bindingInterproscan
GO:0043531Molecular FunctionADP bindingInterproscan
GO:0042981Biological Processregulation of apoptotic processInterproscan

 KEGG pathway
KOEnzymeEnzyme IDpathwaymapIDSource
K02084APAF1; apoptotic protease-activating factor-Platinum drug resistanceko01524deepkoala

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