Detailed information of gene12042.t1 in Actinoscyphia liui

Genomic Location: chr3:43747179...43773779
NR annotation: XP_020903393.1, LOW QUALITY PROTEIN: GATOR complex protein WDR24-like [Exaiptasia diaphana]


 Gene Structure
More details in Jbrowse  Sequence
CDS
Transcript
Protein
 Uniprot
Uniprot termDescription
Q7ZVL2GATOR2 complex protein WDR24 OS=Danio rerio OX=7955 GN=wdr24 PE=2 SV=1
Q7ZX22GATOR2 complex protein WDR24 OS=Xenopus laevis OX=8355 GN=wdr24 PE=2 SV=1
Q96S15GATOR2 complex protein WDR24 OS=Homo sapiens OX=9606 GN=WDR24 PE=1 SV=2
 Gene family
Gene familySubfamily
Ubiquitin FamilyUBD|Other|Beta-prp
Ubiquitin FamilyE3|E3 adaptor Cullin RING|CDC20
Ubiquitin FamilyE3|E3 adaptor Cullin RING|DWD

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF17120zf-RING_16RING/Ubox like zinc-binding domainDomainInterproscan
PF00400WD40WD domain, G-beta repeatRepeatInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR001680RepeatWD40 repeatInterproscan
IPR049566DomainWDR59/RTC1-like, RING zinc finger domainInterproscan
IPR019775Conserved_siteWD40 repeat, conserved siteInterproscan
IPR037590FamilyGATOR2 complex protein WDR24Interproscan
IPR015943Homologous_superfamilyWD40/YVTN repeat-like-containing domain superfamilyInterproscan
IPR036322Homologous_superfamilyWD40-repeat-containing domain superfamilyInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR46200GATOR COMPLEX PROTEIN WDR24Interproscan

 Gene Ontology
GO termsCategoryDescriptionSource
GO:0005515Molecular Functionprotein bindingInterproscan
GO:0005774Cellular Componentvacuolar membraneInterproscan
GO:0005829Cellular ComponentcytosolInterproscan
GO:0016239Biological Processpositive regulation of macroautophagyInterproscan
GO:0032008Biological Processpositive regulation of TOR signalingInterproscan
GO:0034198Biological Processcellular response to amino acid starvationInterproscan
GO:0061700Cellular ComponentGATOR2 complexInterproscan
GO:1904263Biological Processpositive regulation of TORC1 signalingInterproscan

 KEGG pathway
KOEnzymeEnzyme IDpathwaymapIDSource
K20408WDR24, SEA2; SEA/GATOR complex protein SEA2/WDR24-Membrane traffickingko04131deepkoala

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