Detailed information of gene12405.t1 in Actinoscyphia liui

Genomic Location: chr3:49738956...49744685
NR annotation: XP_020907269.1, E3 ubiquitin-protein ligase ZSWIM2 [Exaiptasia diaphana]


 Gene Structure
More details in Jbrowse  Sequence
CDS
Transcript
Protein
 Uniprot
Uniprot termDescription
Q9LUZ9RING-H2 finger protein ATL63 OS=Arabidopsis thaliana OX=3702 GN=ATL63 PE=2 SV=1
Q9SN28RING-H2 finger protein ATL7 OS=Arabidopsis thaliana OX=3702 GN=ATL7 PE=2 SV=1
Q570X5RING-H2 finger protein ATL58 OS=Arabidopsis thaliana OX=3702 GN=ATL58 PE=2 SV=1
 Gene family
Gene familySubfamily
Ubiquitin FamilyE3|E3 activity RING|RING

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF13639zf-RING_2Ring finger domainDomainInterproscan
PF00569ZZZinc finger, ZZ typeDomainInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR043145Homologous_superfamilyZinc finger, ZZ-type superfamilyInterproscan
IPR000433DomainZinc finger, ZZ-typeInterproscan
IPR001841DomainZinc finger, RING-typeInterproscan
IPR013083Homologous_superfamilyZinc finger, RING/FYVE/PHD-typeInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR46539E3 UBIQUITIN-PROTEIN LIGASE ATL42Interproscan

 Gene Ontology
GO termsCategoryDescriptionSource
GO:0008270Molecular Functionzinc ion bindingInterproscan

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