Detailed information of gene12772.t1 in Actinoscyphia liui

Genomic Location: chr3:55844924...55860235
NR annotation: XP_020893054.1, next to BRCA1 gene 1 protein [Exaiptasia diaphana]


 Gene Structure
More details in Jbrowse  Sequence
CDS
Transcript
Protein
 Gene family
Gene familySubfamily
Ubiquitin FamilyULD|UFD|PB1

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF16158N_BRCA1_IGIg-like domain from next to BRCA1 geneDomainInterproscan
PF00564PB1PB1 domainDomainInterproscan
PF00569ZZZinc finger, ZZ typeDomainInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR000433DomainZinc finger, ZZ-typeInterproscan
IPR013783Homologous_superfamilyImmunoglobulin-like foldInterproscan
IPR032350DomainNext to BRCA1, central domainInterproscan
IPR000270DomainPB1 domainInterproscan
IPR043145Homologous_superfamilyZinc finger, ZZ-type superfamilyInterproscan
IPR009060Homologous_superfamilyUBA-like superfamilyInterproscan
IPR015940DomainUbiquitin-associated domainInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR20930OVARIAN CARCINOMA ANTIGEN CA125-RELATEDInterproscan

 Gene Ontology
GO termsCategoryDescriptionSource
GO:0008270Molecular Functionzinc ion bindingInterproscan
GO:0005515Molecular Functionprotein bindingInterproscan

 KEGG pathway
KOEnzymeEnzyme IDpathwaymapIDSource
K17987NBR1; next to BRCA1 gene 1 protein-Mitochondrial biogenesisko03029deepkoala

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