Detailed information of gene14341.t2 in Actinoscyphia liui

Genomic Location: chr4:12571347...12679456
NR annotation: XP_028516576.1, E3 ubiquitin-protein ligase UBR4 [Exaiptasia diaphana]


 Gene Structure
More details in Jbrowse  Sequence
CDS
Transcript
Protein
 Uniprot
Uniprot termDescription
Q5T4S7E3 ubiquitin-protein ligase UBR4 OS=Homo sapiens OX=9606 GN=UBR4 PE=1 SV=1
A2AN08E3 ubiquitin-protein ligase UBR4 OS=Mus musculus OX=10090 GN=Ubr4 PE=1 SV=1
Q2TL32E3 ubiquitin-protein ligase UBR4 OS=Rattus norvegicus OX=10116 GN=Ubr4 PE=1 SV=2
 Gene family
Gene familySubfamily
Ubiquitin FamilyE3|E3 activity|UBR-box

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF13764E3_UbLigase_R4E3 ubiquitin-protein ligase UBR4FamilyInterproscan
PF19423E3_UBR4_NE3 ubiquitin-protein ligase UBR4 N-terminalDomainInterproscan
PF02207zf-UBRPutative zinc finger in N-recognin (UBR box)FamilyInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR011049Homologous_superfamilySerralysin-like metalloprotease, C-terminalInterproscan
IPR003126DomainZinc finger, UBR-typeInterproscan
IPR003903Conserved_siteUbiquitin interacting motifInterproscan
IPR025704DomainE3 ubiquitin ligase UBR4, C-terminalInterproscan
IPR047509DomainE3 ubiquitin-protein ligase UBR4-like, UBR-boxInterproscan
IPR045841DomainE3 ubiquitin-protein ligase UBR4, N-terminalInterproscan
IPR016024Homologous_superfamilyArmadillo-type foldInterproscan
IPR036322Homologous_superfamilyWD40-repeat-containing domain superfamilyInterproscan
IPR045189FamilyE3 ubiquitin ligase UBR4-likeInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR21725E3 UBIQUITIN-PROTEIN LIGASE UBR4Interproscan

 Gene Ontology
GO termsCategoryDescriptionSource
GO:0008270Molecular Functionzinc ion bindingInterproscan
GO:0005515Molecular Functionprotein bindingInterproscan

 KEGG pathway
KOEnzymeEnzyme IDpathwaymapIDSource
K10691UBR4, ZUBR1; E3 ubiquitin-protein ligase UBR4EC:2.3.2.27
Ubiquitin systemko04121deepkoala

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