Detailed information of gene15234.t1 in Actinoscyphia liui

Genomic Location: chr4:28515650...28524828
NR annotation: XP_020907940.1, retinoic acid receptor RXR-alpha-B [Exaiptasia diaphana]


 Gene Structure
More details in Jbrowse  Sequence
CDS
Transcript
Protein
 Uniprot
Uniprot termDescription
P28700Retinoic acid receptor RXR-alpha OS=Mus musculus OX=10090 GN=Rxra PE=1 SV=1
Q05343Retinoic acid receptor RXR-alpha OS=Rattus norvegicus OX=10116 GN=Rxra PE=1 SV=1
P19793Retinoic acid receptor RXR-alpha OS=Homo sapiens OX=9606 GN=RXRA PE=1 SV=1
 Gene family
Gene familySubfamily
Transcription Factors FamilyESR-like
Transcription Factors FamilyMiscellaneous
Transcription Factors FamilyNGFIB-like
Transcription Factors FamilyRXR-like
Transcription Factors FamilySF-like
Transcription Factors FamilyTHR-like
Transcription Factors FamilyGCNF-like

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF00104Hormone_recepLigand-binding domain of nuclear hormone receptorDomainInterproscan
PF00105zf-C4Zinc finger, C4 type (two domains)DomainInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR035500Homologous_superfamilyNuclear hormone receptor-like domain superfamilyInterproscan
IPR000536DomainNuclear hormone receptor, ligand-binding domainInterproscan
IPR001628DomainZinc finger, nuclear hormone receptor-typeInterproscan
IPR050200FamilyNuclear hormone receptor family NR3 subfamilyInterproscan
IPR001723FamilyNuclear hormone receptorInterproscan
IPR013088Homologous_superfamilyZinc finger, NHR/GATA-typeInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR48092KNIRPS-RELATED PROTEIN-RELATEDInterproscan

 Gene Ontology
GO termsCategoryDescriptionSource
GO:0003700Molecular FunctionDNA-binding transcription factor activityInterproscan
GO:0006355Biological Processregulation of DNA-templated transcriptionInterproscan
GO:0008270Molecular Functionzinc ion bindingInterproscan
GO:0043565Molecular Functionsequence-specific DNA bindingInterproscan
GO:0000790Cellular ComponentchromatinInterproscan
GO:0004879Molecular Functionnuclear receptor activityInterproscan

 KEGG pathway
KOEnzymeEnzyme IDpathwaymapIDSource
K08705NR5A3, ftz-f1; nuclear receptor subfamily 5 group A member 3-Nuclear receptorsko03310deepkoala

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