Detailed information of gene15858.t1 in Actinoscyphia liui

Genomic Location: chr4:36218856...36231318
NR annotation: XP_020899230.1, retinoic acid receptor RXR-alpha-B [Exaiptasia diaphana]


 Gene Structure
More details in Jbrowse  Sequence
CDS
Transcript
Protein
 Uniprot
Uniprot termDescription
Q5RAM2Estrogen-related receptor gamma OS=Pongo abelii OX=9601 GN=ESRRG PE=2 SV=1
P22448Retinoic acid receptor beta OS=Gallus gallus OX=9031 GN=RARB PE=2 SV=2
Q9W6B3Retinoic acid receptor beta OS=Coturnix japonica OX=93934 GN=RARB PE=2 SV=1
 Gene family
Gene familySubfamily
Transcription Factors FamilyMiscellaneous
Transcription Factors FamilyNGFIB-like
Transcription Factors FamilyRXR-like
Transcription Factors FamilyTHR-like
Transcription Factors FamilyGCNF-like

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF00104Hormone_recepLigand-binding domain of nuclear hormone receptorDomainInterproscan
PF00105zf-C4Zinc finger, C4 type (two domains)DomainInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR035500Homologous_superfamilyNuclear hormone receptor-like domain superfamilyInterproscan
IPR001628DomainZinc finger, nuclear hormone receptor-typeInterproscan
IPR050200FamilyNuclear hormone receptor family NR3 subfamilyInterproscan
IPR000536DomainNuclear hormone receptor, ligand-binding domainInterproscan
IPR013088Homologous_superfamilyZinc finger, NHR/GATA-typeInterproscan
IPR001723FamilyNuclear hormone receptorInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR48092KNIRPS-RELATED PROTEIN-RELATEDInterproscan

 Gene Ontology
GO termsCategoryDescriptionSource
GO:0003700Molecular FunctionDNA-binding transcription factor activityInterproscan
GO:0006355Biological Processregulation of DNA-templated transcriptionInterproscan
GO:0008270Molecular Functionzinc ion bindingInterproscan
GO:0043565Molecular Functionsequence-specific DNA bindingInterproscan
GO:0000790Cellular ComponentchromatinInterproscan
GO:0004879Molecular Functionnuclear receptor activityInterproscan
GO:0005634Cellular ComponentnucleusInterproscan
GO:0006357Biological Processregulation of transcription by RNA polymerase IIInterproscan
GO:0034056Molecular Functionestrogen response element bindingInterproscan

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