Detailed information of gene15946.t1 in Actinoscyphia liui

Genomic Location: chr4:37188879...37209829
NR annotation: XP_028517203.1, uncharacterized protein LOC110246743 [Exaiptasia diaphana]


 Gene Structure
More details in Jbrowse  Sequence
CDS
Transcript
Protein
 Uniprot
Uniprot termDescription
O95243Methyl-CpG-binding domain protein 4 OS=Homo sapiens OX=9606 GN=MBD4 PE=1 SV=1
Q9Z2D7Methyl-CpG-binding domain protein 4 OS=Mus musculus OX=10090 GN=Mbd4 PE=1 SV=1
Q0IGK1Methyl-CpG-binding domain protein 4-like protein OS=Arabidopsis thaliana OX=3702 GN=MBD4L PE=1 SV=1
 Gene family
Gene familySubfamily
Transcription Factors FamilyMBD

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF00730HhH-GPDHhH-GPD superfamily base excision DNA repair proteinDomainInterproscan
PF00024PAN_1PAN domainDomainInterproscan
PF01429MBDMethyl-CpG binding domainDomainInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR003265DomainHhH-GPD domainInterproscan
IPR003609DomainPAN/Apple domainInterproscan
IPR001739DomainMethyl-CpG DNA bindingInterproscan
IPR014716Homologous_superfamilyFibrinogen, alpha/beta/gamma chain, C-terminal globular, subdomain 1Interproscan
IPR016177Homologous_superfamilyDNA-binding domain superfamilyInterproscan
IPR012314DomainPeptidase M12B, GON-ADAMTSsInterproscan
IPR036056Homologous_superfamilyFibrinogen-like, C-terminalInterproscan
IPR045138FamilyMethyl-CpG binding protein MeCP2/MBD4Interproscan
IPR011257Homologous_superfamilyDNA glycosylaseInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR15074METHYL-CPG-BINDING PROTEINInterproscan

 Gene Ontology
GO termsCategoryDescriptionSource
GO:0006284Biological Processbase-excision repairInterproscan
GO:0003677Molecular FunctionDNA bindingInterproscan
GO:0004222Molecular Functionmetalloendopeptidase activityInterproscan
GO:0008270Molecular Functionzinc ion bindingInterproscan
GO:0005634Cellular ComponentnucleusInterproscan
GO:0003824Molecular Functioncatalytic activityInterproscan
GO:0006281Biological ProcessDNA repairInterproscan

TOP