Detailed information of gene16739.t1 in Actinoscyphia liui Gene info
Gene IDAnnotationChromosomeStartEndStrand
gene16739.t1PROTEIN CBG26694chr45060901550640836-

Gene Structure
More details in Jbrowse Sequence
CDS
Transcript
Protein

Gene family
Gene familySubfamily
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Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF00078RVT_1Reverse transcriptase (RNA-dependent DNA polymerase)DomainInterproscan
PF00098zf-CCHCZinc knuckleDomainInterproscan
PF05649Peptidase_M13_NPeptidase family M13FamilyInterproscan
PF17921Integrase_H2C2Integrase zinc binding domainDomainInterproscan

InterPro
InterPro termTypeDescriptionSource
IPR000477DomainReverse transcriptase domainInterproscan
IPR000718FamilyPeptidase M13Interproscan
IPR001878DomainZinc finger, CCHC-typeInterproscan
IPR008753DomainPeptidase M13, N-terminal domainInterproscan
IPR021109Homologous_superfamilyAspartic peptidase domain superfamilyInterproscan
IPR024079Homologous_superfamilyMetallopeptidase, catalytic domain superfamilyInterproscan
IPR036875Homologous_superfamilyZinc finger, CCHC-type superfamilyInterproscan
IPR038269Homologous_superfamilySCAN domain superfamilyInterproscan
IPR041588DomainIntegrase zinc-binding domainInterproscan
IPR042089Homologous_superfamilyPeptidase M13, domain 2Interproscan
IPR043128Homologous_superfamilyReverse transcriptase/Diguanylate cyclase domainInterproscan
IPR043502Homologous_superfamilyDNA/RNA polymerase superfamilyInterproscan
IPR050951FamilyRetrovirus-related Pol polyproteinInterproscan

PANTHER
PANTHER termDescriptionSource
PTHR37984PROTEIN CBG26694Interproscan

Gene Ontology
GO termsCategoryDescriptionSource
GO:0003676Molecular Functionnucleic acid bindingInterproscan
GO:0004222Molecular Functionmetalloendopeptidase activityInterproscan
GO:0006508Biological ProcessproteolysisInterproscan
GO:0008237Molecular Functionmetallopeptidase activityInterproscan
GO:0008270Molecular Functionzinc ion bindingInterproscan

KEGG pathway
KOEnzymeEnzyme IDpathwaymapIDSource
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