Gene detail

Detailed information of gene16922.t1 in Actinoscyphia liui

Genomic Location: chr4:53396023...53400972
NR annotation: XP_046858295.1, uncharacterized protein LOC124451716 [Xenia sp. Carnegie-2017]

Gene Structure

More details in Jbrowse

Sequence

CDS

gene16922.t1

ATGGACACATCAAATGCCCAATTGCAGAAATGCAAAGAGCTTTTAGAAGAAGTTTCAAAGCTGTGTACTGGAATTGACACAACTTCTGTCAGGCCACCATCTGCAAGTAATCCAGTAACAATATCTGCTTCCTCACATTCAACTGCTTCACATCCAACTGCTTCACGATTGTCTGCTTCCTCACATGCAACTGCTTCACGATCATCTGCTTCATCATCCTGGGAGGAGCATAGGAGGCTATTTGGATTTCAGGCACGTTCTGCCAACAACCAATCCAAAAGAAAGACATCCAAAGCTACAACTAAACAAGTTAAAAAGAAAAAGGAAGCTACATGGACTAGAACCTTTGTTTGTCTCTCTGACAAAAACTCACCCCGAGTACCCAGTAGTGGAGATTATGTGAGTCTAAGAAAGGCCTCTTTGGGTGAGAGGAAACTAACGCTCTTGGTCTGTGACACATGTCACAATGTCGATGCAAAATTGAAAGAAGCTTATCCAAAGTTGGAGCTAGCAGGAGGGTACACACTGGCATGTAGCAGCATAACCCGCCAACTCCAGCACATAGACCCACCATACAGTGTGCAAAGGTTGAAAGAATCCTGTGGACAAGGAAAGATTTTTGTAATCCCTCTACAGAAGAGCCTGGATTTAACTCCGGATTATGTAGCAGAAGATGAGGGGGAAGATGATCTACTTGAGAGATGCACAAGATGTAAAGATTTATTCTATCTTCAAGAATTATCTACACATTTAGAGACATGCAGAGATAAATCAGAAATTATAGACTGCACAGACTCTGATAATGATGCAACACCACCACGAAGTACTATCACATCCCCACTTACAGCATTACACAGTCCACACACTACGATCAATAGTTATAGTGATGATAAGCAAGCAGGTATTGGGGATGAGGATGATGATGACCTCCTTTATTCTCCCTTTGAAAACTCTGATGGTAATTCATCTACTTCCAAGCATGTACCTACATCTGATCCTGCCACAGATGTCAACAACACAGTGCCTACATCTGATCCTGCAACAGATGTCAACAACACAGTGCCTACATCTGATCCTGTCACAGATGTCAACAACACAGTGCCTACATCTGATCCTGCAACAGATGTCAACAACACAGTGCCTACATCTGATCCTGTCACAGATGTCAACAACACAGTGCCTACATCTGATCCTGCAACAGATGTCAACAACAATGTCAACAACACAGTGCCTACATCTGATCCTGCAACAGATGTCAACAACACAGTGCCACCAACTGCCACCAGTGGTTCTAAACAGCGAAAGAGTGAGCTTGAAGAAAGTGTGAGATGTTGTATTGAATATTGTATGCACAAAGAAATACATAATCCTGTTGAAATACTAAGATGTGCTCAAAGTGCAATAGTTGATGGTAGAGATCTAGACGTCACCAAAGTTTCAGAGAGTTTGACAGGAAATACCAATGAAATAATGGCCAACAGATATGACATCATTGGAAGTGCTTTGGAAGAATTTCAGGACCTCGAAAATCCTAGGCTGACCATTAAAGTGAACTTTTATGGTGAAATTGCCTCAGATTCTGGTGGACCCAGAAGAGAATTCTTCAGATTATGTCTGCAGCAAATTAAAAGCAAGTATTTTGACAAAGGCTTGATGGAACACTTGTCAAAAGATTATGTCACTGTTGGTTTAATAATGGCACTAAGTGTATTGCAGAATGGTAATATTCCCAGATTTCTATCTGAAGATCAGCTTCAGGAACTCTTTAATTCAAACCAGCCATCCACATGCATTGGAAACCTCCGCAAGGGGTTTGCCATGGTCGGTCTTTACCAGATTGGCAGAGCATTACCATTGTTTATTCATCTTTTTCGTCCTTCACCAGTAGTTATGTTGTCAAAACGACAACTACTATCAATTTTAAAACCAAAATTTTCAGAAGCTCGTTCAAATGCTCATAAACATGAGTGTTCTGTGTATTCTAGTTTTACCAAATATTGCCGTGAAGCTGCAAGTGGTCGAAGGGAGAACATCACTCTGAATCAAATTATTCAATTTGTAACGGGAACAGATGAAGAACCACCATTGGGGTTTGGTGTACCACCATCGATTGAATTTCCAGAAACAAATAATACCATATATTTCACTCCAACTGCCAATACATGCGCAAACATTTTGCACCTTCCAAGGCCTACACACAAAGACCCTCTACATACATACATACATACATACTTTATTAGGTTTTCCAACAAGGCTTTTCAAAACCCATTACATTGA

Transcript

gene16922.t1

Protein

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF00632	HECT	HECT-domain (ubiquitin-transferase)	Domain	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR035983	Homologous_superfamily	HECT, E3 ligase catalytic domain	Interproscan
IPR000569	Domain	HECT domain	Interproscan

PANTHER

PANTHER term	Description	Source
-	-	-

Gene Ontology

GO terms	Category	Description	Source
GO:0004842	Molecular Function	ubiquitin-protein transferase activity	Interproscan