Detailed information of gene17181.t1 in Actinoscyphia liui

Genomic Location: chr4:58220946...58235794
NR annotation: XP_048579020.1, uncharacterized protein LOC125560735 [Nematostella vectensis]


 Gene Structure
More details in Jbrowse  Sequence
CDS
Transcript
Protein
 Uniprot
Uniprot termDescription
Q9NBX4Probable RNA-directed DNA polymerase from transposon X-element OS=Drosophila melanogaster OX=7227 GN=X-elementORF2 PE=3 SV=1
Q95SX7Probable RNA-directed DNA polymerase from transposon BS OS=Drosophila melanogaster OX=7227 GN=RTase PE=2 SV=1
Q03274Retrovirus-related Pol polyprotein from type-1 retrotransposable element R2 (Fragment) OS=Popillia japonica OX=7064 PE=4 SV=1
 Gene family
Gene familySubfamily
Ubiquitin FamilyE3|E3 activity RING|PHD

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF00078RVT_1Reverse transcriptase (RNA-dependent DNA polymerase)DomainInterproscan
PF14529Exo_endo_phos_2Endonuclease-reverse transcriptase DomainInterproscan
PF00628PHDPHD-fingerDomainInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR000477DomainReverse transcriptase domainInterproscan
IPR011011Homologous_superfamilyZinc finger, FYVE/PHD-typeInterproscan
IPR043502Homologous_superfamilyDNA/RNA polymerase superfamilyInterproscan
IPR001965DomainZinc finger, PHD-typeInterproscan
IPR013083Homologous_superfamilyZinc finger, RING/FYVE/PHD-typeInterproscan
IPR005135DomainEndonuclease/exonuclease/phosphataseInterproscan
IPR036691Homologous_superfamilyEndonuclease/exonuclease/phosphatase superfamilyInterproscan
IPR019787DomainZinc finger, PHD-fingerInterproscan
IPR019786Conserved_siteZinc finger, PHD-type, conserved siteInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR33395TRANSCRIPTASE, PUTATIVE-RELATED-RELATEDInterproscan

 Gene Ontology
GO termsCategoryDescriptionSource
GO:0003824Molecular Functioncatalytic activityInterproscan

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