Gene detail

Detailed information of gene17490.t1 in Actinoscyphia liui

Genomic Location: chr5:341847...349743
NR annotation: CAH3187288.1, unnamed protein product, partial [Porites evermanni]

Gene Structure

More details in Jbrowse

Sequence

CDS

gene17490.t1

ATGCTGATGTCTTCAGTTGAGAAAGAAGCTTCATGGCACAAATCATGCCGTTTACAATTTAGTACATCTAAACTGAACAAAACAAAAGAAAGAGCAGCTCGCAAAAGAGAGAAGGATCAAGCACAGCCAGAAGACGAGGAAGTCCCATCGAAAACACGGAGACTGTCTTCCCACAATAAAGAGAACTGTATATTGTGTGGTCAGGGTGGCCAACTTCATGAAGTCACTACTTTCGCCACTGATGAGAAACTCCGCCGCATGATAACAGAACTTGAAGACATCACGCTCTTACCTAAAATTTCTGGGGTTGATCTCATGGCAGCTGAAGCGAAATATCATTTCAAATGCATGACAGACCTGCGAAACCGCTACAGAGGTCATATATCGAGAAAACGACAAGAATCCTGTGAAAAAGAGGATGAGAAAATAAAGGAGTCTCAGGCCTTTATCGAGTTGATTGAATATATTGAGAGGTCTGTTGACAATGACAAGTTGCTGTTTCTGCTTTCTGAGTTGCATTCACTATATGTAAGTCGACTTGAAACCTTAGGCATTCACAAACAAGTAAATAAAACTAGACTTAAAACCTCTTTATTGGAAAACTTCCCAGAAGCTCAAGAGCAAAATGATGGGGAAAATGTTGTCATTATATTCAAGAAAGCAATTCAGGGCATGCTCAAAGAAGCAGTTCAGCAAAGAGATTTCTCAGAGGATGCTATGATTTTAGCTAAGGCTTCAGCAATTGTACGCAAAGACATGTTTGGCCATAAAGGCTTCACATTTTCTGGAAGTTTTAAAGAAGACTGCCAAGAAAGGTCCGTCCCTGCTAGTCTGAAATCATTGGTATCAATGATATTAAGTGGGGTGAACATTGAGAACACTGAGGCACAAGAATCCCAACCATGTTTAACAGTGTGCCAGACCATTCTTTTCAATGCCAAGGAACGATCAACGACAAAGTCGAAAACCGGCCAGACACGGCATACCAAAGCACGCGAACCACCTCTTCCTTTGTACATTGGATTTAACGTGCACGCATTGACGAGGAGTAGGACACTCATAGCCAAGCTGTATCAGATGGGAATCTCGGTATCTTACCAAAGGATCATGGAGTTGGAGGACATGCTTGCTACTTCAATTAGTGAGCGCTTTGAACTGGACGGCTGTGTGGCACCTGCTTGTTTGAGAAAGGGAGTTTTTACTATCGGAGCTATTGATAATTTAGATCACAATCCTAGCTCGACGACGGCAACCTCGTCCTTCCATGGCACTGGCATTAGCGTGTTTCAGTTACCAACAGAGAATAATCCTGGCGAGGAGAGGCCACCAGTGATTTTACCTCCACAGGGAACAGGGCATTCTCTCCCAGAGGAATATGCTACTGTTCACCCTGTGGAGTTAAACACTAATAAGGCAGCTGTCCCAGTCTGTGAGATGAAGGAAGCAGTGAGTTGTATGGCTGAAGAGAAACAAAGTGAAGAACGGTGGGTAGAGCATTCGCTTGGAAAATTAGACGAAGAATCTGTTACTTCTGGTGATACAGTGACTTGGGCAGCATATCATGCTTCAAACCAGACGGAAGAGGACCCACCTGCTTTGACTGCGCTACTTCCACTGTTCTACGAAAAGGCGGCAACCCCAGCGATGGTCAAGCACGGTATGGATGTCTTAAAGCAGGCTATAACCTTCCTCAACCAGGATCAGGTTCCCATCATCGCCGTTGACCAGCCTCTCTTTGCGTTAGCGAAGATGGTTCAGTGGAAGTGGCCAGCCTCACATGGAGAGCAAGCATATGTTGTCATGCTAGGTGGCCTGCACATCGAAATGGCACTATGGAGTGTGCTTGGCGATTTGCTAGACGGATCTGGCTGGACTGTCGCCTTGAGTGAAGCTGATGTGGCCTCGTCTGGTGTGGCGGATTCCTTCTTGAAGGCGACGCATCTAACAAGAACTAGGCATGGTCATCAAGTCACAGCTCTGGCTCTTTACAAACTAAAGAGAGAGGCATTTTCCCAGTGCGCTGATAAGACATCAATATCTACATGGGAGGAAGTGAAGAAGAGAAGAAGCCCTACGTTTCTCTTTTGGGATTCAATCATACAGTACGAGACACTGGTGTTACTTGTTATACGCGCACAACGGCAGCGTAACTTCAGCTTGTACGTCGAAGCCCTGGAAGAGCTGATACCTTTATTCTTTGCTCTCGATCACGTCAACTACGCACGATGGACCCCCATCCATATTCGTGACATGAAATCTCTACCAGACAGCATCGCAAAGGAGTTTCAGAATGAAGGCCACTGGGTATTGTCTAAAACAGGCAATAAGTTTTCTGCTATCCCCTTTGACCAGGCTCATGAACAGGAAAACAAGGTTGTCAAGAGTGTAGGTGGCGCAGTTGGCCTTACAGAGAACCCTGTAGCCTTTAGACGATGGATGCTTTCAGGTCCTGAGACAACGAGAATTCTGCATCAATTTGAGGAGCAATATCTAGCAGATAGTGAGGAGTCCTGTGACCGTCCAAATCATGAGATGGGACTAAGTGCACAAAAGACGTTCAAGCAGCAGGTGAACAATCTGGTAGATGTGATTAGAAGGATGGGGAACCCTTTTCTGGATGACTTCCCAGAGCTAGTTACACTAGACAGCAGAGATTGCATGGATGATGCTGTAGCCAAGGCAGTGGTTAACCTTGAGCAGCTTGGAAAGACGCAGTACCAGAATTTTGTGAAGGCAGTTATCAAGGACAGGACGACCTCAATAAGCAATCCCATCAAGAAGAACAAGCTCCCCCTTTACGGGAAACAGCCCTCGCGCACCAAATCCAAGCAGTCCAAGACAATCACGGCACTACAGAACGTCTCCCTTTTTGCACAATTGTACATCGCAATGCAGAGTCGTGATGCTGACCTCGGGGAATTCTTCAGCCATGAAGTACAGCCATTCCCTCCCTCGTTATCAGAATTTGGTAATCTCCGTCTGCCAAGTATGAAGTCCGATCTTCTGAAGTGCATCGCCCAGCCGCGACAGCCCGAGCCTCCAACTCGGTTTGACTGCAGGATCTGTGATGGTGCTGTTATTGTCCATTGTCTTCCTGTGACTGGGGCGATCACCTTCGATGACTATGCAGAGAACGTCTTCATTCCTCATATCCGCAGTCAGGGTAGCAGACGAGTGGACGTTGTTTGGGATACCTATGTCCCTGATAGCCTGAAAGAATCGACACGAGAAAAGAGAGGGAAGGGCGTGCGTCGTAAAGTTTCAGGTGGCACCAAGCTCCCGCCGAACTGGATGCAGTTCCTGCGTGATTCAGTAAACAAGGAAGAACTGTTTACATTTCTGACGTCTAAGGTTGCTGCGTACAACTGGCCAGAGAGAAAGACGGTCTACGTGACATCAGGGATTTCTGTGATCTCCATTGGCTCGGACAGATCCATGCCTGAATGTAACCATGAGGAGGCAGACACAAGGATCGTCGTCCATGTTATACATGCCATTCAAGTTGACCAGGCGAAATCTGTACTGGTCCGAACCGTCGATACGGATATCATTGTTATCTTGATAGGAAAGTTCCACCATCTCAAAGCAATCCAGCCTGACTTGGACCTGTGGGTGGCGTTCGGAATGGGACGCAACTTCTCATTCATCAGCGTCAACATCATTTGTGCTGGTCTAGGTGAAGCGCGATCTAGATCCCTACCCGTTTTCCACGCGCTGAGTGGCTGTGATACCACCTCAACCTTCTATGGGAAAGGCAAGAAGTCCACCTGGCAGGCATGGGAGCTGTATCCAGACATAACCCCGACATTTGAGTTTCTTGCGAATAACCCCTTCCATCAGCTGACGGTGGATTCTGACCATTTCAAGCGAATTGAAAGGTACACAGTCATCCTATTCGACAAGTTGAGCCCTTTGGATTGCATTAACAAGACAAGAATGGAGCTCTTCTGTAAGAACAACAGAGCTATGGACAAGCTTCCACCAACGCAGGTTTTAGTTTCTAACAAAACTGAAAATGACACCTTGTACAATGAAGTCTGTGACGAAATTGGTTGGTACAAAGACATAACTGCTACAAATGTCAAAGAGTTTGTTGAAATGGCTTCATACCACTACTGCCTTGTGAAAAACAGAGCAAACTTGGATGAGTTCATCAGAGGATTGGATTCACTGCAGCTTGTTCAACTAATCAAACAATATCCAGATTCAAGAATCAAATTGGAGGACTTTCTACAGTTCTTATCTGGAAGCAGCAACATACCCCCAGGGGGTTTTGATATTGTACCTACAGTTAATTTTAGTGATAGTTCTCCTTTCCCATATGTATCCACATGTGCTCTCACACTAACATTGCCTTTAAAACTTCAAGATGAAGTATTCAAGCAAAATGTGGTCGAGGCAGTCATTAGTTCCCCTTTCTTTGGCAAAGTTTAA

Transcript

gene17490.t1

Protein

Gene family

Gene family	Subfamily
Ubiquitin Family	E3\|E3 activity\|HECT

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF00632	HECT	HECT-domain (ubiquitin-transferase)	Domain	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR000569	Domain	HECT domain	Interproscan
IPR035983	Homologous_superfamily	HECT, E3 ligase catalytic domain	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR47018	CXC DOMAIN-CONTAINING PROTEIN-RELATED	Interproscan

Gene Ontology

GO terms	Category	Description	Source
GO:0004842	Molecular Function	ubiquitin-protein transferase activity	Interproscan