Detailed information of gene18232.t1 in Actinoscyphia liui

Genomic Location: chr5:14329223...14354735
NR annotation: XP_020913854.1, E3 ubiquitin-protein ligase UHRF1 isoform X3 [Exaiptasia diaphana]


 Gene Structure
More details in Jbrowse  Sequence
CDS
Transcript
Protein
 Uniprot
Uniprot termDescription
F6UA42E3 ubiquitin-protein ligase UHRF1 OS=Xenopus tropicalis OX=8364 GN=uhrf1 PE=3 SV=2
E7EZF3E3 ubiquitin-protein ligase UHRF1 OS=Danio rerio OX=7955 GN=uhrf1 PE=1 SV=1
Q96T88E3 ubiquitin-protein ligase UHRF1 OS=Homo sapiens OX=9606 GN=UHRF1 PE=1 SV=1
 Gene family
Gene familySubfamily
Ubiquitin FamilyULD|UBL|NEDD8
Ubiquitin FamilyULD|UFD/UBQ|UBQ_Other
Ubiquitin FamilyULD|UFD/UBQ|UBQ_PIM

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF12148TTDTandem tudor domain within UHRF1DomainInterproscan
PF00240ubiquitinUbiquitin familyDomainInterproscan
PF02182SAD_SRASAD/SRA domainDomainInterproscan
PF00628PHDPHD-fingerDomainInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR015947Homologous_superfamilyPUA-like superfamilyInterproscan
IPR003105DomainSRA-YDGInterproscan
IPR021991DomainUHRF1, tandem tudor domainInterproscan
IPR013083Homologous_superfamilyZinc finger, RING/FYVE/PHD-typeInterproscan
IPR001841DomainZinc finger, RING-typeInterproscan
IPR019787DomainZinc finger, PHD-fingerInterproscan
IPR001965DomainZinc finger, PHD-typeInterproscan
IPR011011Homologous_superfamilyZinc finger, FYVE/PHD-typeInterproscan
IPR000626DomainUbiquitin-like domainInterproscan
IPR029071Homologous_superfamilyUbiquitin-like domain superfamilyInterproscan
IPR036987Homologous_superfamilySRA-YDG superfamilyInterproscan
IPR045134FamilyUHRF1/2-likeInterproscan
IPR017907Conserved_siteZinc finger, RING-type, conserved siteInterproscan
IPR019786Conserved_siteZinc finger, PHD-type, conserved siteInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR14140E3 UBIQUITIN-PROTEIN LIGASE UHRF-RELATEDInterproscan

 Gene Ontology
GO termsCategoryDescriptionSource
GO:0005515Molecular Functionprotein bindingInterproscan
GO:0010216Biological Processobsolete negative regulation of gene expression via chromosomal DNA cytosine methylationInterproscan
GO:0016567Biological Processprotein ubiquitinationInterproscan
GO:0061630Molecular Functionubiquitin protein ligase activityInterproscan

 KEGG pathway
KOEnzymeEnzyme IDpathwaymapIDSource
K10638UHRF1, NP95; E3 ubiquitin-protein ligase UHRF1EC:2.3.2.27
Chromosome and associated proteinsko03036deepkoala

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