Detailed information of gene18331.t1 in Actinoscyphia liui

Genomic Location: chr5:16441529...16450824
NR annotation: XP_020912669.1, transcription factor coe2 [Exaiptasia diaphana]


 Gene Structure
More details in Jbrowse  Sequence
CDS
Transcript
Protein
 Uniprot
Uniprot termDescription
O08791Transcription factor COE3 OS=Mus musculus OX=10090 GN=Ebf3 PE=1 SV=1
Q9H4W6Transcription factor COE3 OS=Homo sapiens OX=9606 GN=EBF3 PE=1 SV=2
O73742Transcription factor COE3 OS=Xenopus laevis OX=8355 GN=coe3 PE=2 SV=2
 Gene family
Gene familySubfamily
Transcription Factors FamilyCOE

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF01833TIGIPT/TIG domainDomainInterproscan
PF16423COE1_HLHTranscription factor COE1 helix-loop-helix domainDomainInterproscan
PF16422COE1_DBDTranscription factor COE1 DNA-binding domainDomainInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR002909DomainIPT domainInterproscan
IPR032200DomainTranscription factor COE, DNA-binding domainInterproscan
IPR014756Homologous_superfamilyImmunoglobulin E-setInterproscan
IPR003523FamilyTranscription factor COEInterproscan
IPR032201DomainTranscription factor COE, helix-loop-helix domainInterproscan
IPR013783Homologous_superfamilyImmunoglobulin-like foldInterproscan
IPR018350Conserved_siteTranscription factor COE, conserved siteInterproscan
IPR038173Homologous_superfamilyTranscription factor COE, DNA-binding domain superfamilyInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR10747TRANSCRIPTION FACTOR COE FAMILY MEMBERInterproscan

 Gene Ontology
GO termsCategoryDescriptionSource
GO:0003677Molecular FunctionDNA bindingInterproscan
GO:0000978Molecular FunctionRNA polymerase II cis-regulatory region sequence-specific DNA bindingInterproscan
GO:0000981Molecular FunctionDNA-binding transcription factor activity, RNA polymerase II-specificInterproscan
GO:0006355Biological Processregulation of DNA-templated transcriptionInterproscan
GO:0006357Biological Processregulation of transcription by RNA polymerase IIInterproscan

 KEGG pathway
KOEnzymeEnzyme IDpathwaymapIDSource
K09103EBF, COE; early B-cell factor-Transcription factorsko03000deepkoala

TOP