Detailed information of gene19618.t1 in Actinoscyphia liui

Genomic Location: chr5:33455262...33457331
NR annotation: XP_020894902.1, E3 ubiquitin-protein ligase RNF216 [Exaiptasia diaphana]


 Gene Structure
More details in Jbrowse  Sequence
CDS
Transcript
Protein
 Uniprot
Uniprot termDescription
Q9NWF9E3 ubiquitin-protein ligase RNF216 OS=Homo sapiens OX=9606 GN=RNF216 PE=1 SV=3
P58283E3 ubiquitin-protein ligase RNF216 OS=Mus musculus OX=10090 GN=Rnf216 PE=1 SV=3
 Gene family
Gene familySubfamily
Ubiquitin FamilyE3|E3 activity|RBR

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
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 InterPro
InterPro termTypeDescriptionSource
IPR047546DomainE3 ubiquitin-protein ligase RNF216, Rcat domainInterproscan
IPR002867DomainIBR domainInterproscan
IPR013083Homologous_superfamilyZinc finger, RING/FYVE/PHD-typeInterproscan
IPR044066DomainTRIAD supradomainInterproscan
IPR047545DomainE3 ubiquitin-protein ligase RNF216, BRcat domainInterproscan
IPR051628FamilyLinear Ubiquitination-Associated E3 LigasesInterproscan
IPR047544DomainE3 ubiquitin-protein ligase RNF216, RING finger, HC subclassInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR22770UBIQUITIN CONJUGATING ENZYME 7 INTERACTING PROTEIN-RELATEDInterproscan

 Gene Ontology
GO termsCategoryDescriptionSource
GO:0008270Molecular Functionzinc ion bindingInterproscan
GO:0000151Cellular Componentubiquitin ligase complexInterproscan
GO:0004842Molecular Functionubiquitin-protein transferase activityInterproscan
GO:0043130Molecular Functionubiquitin bindingInterproscan
GO:0043161Biological Processproteasome-mediated ubiquitin-dependent protein catabolic processInterproscan
GO:0071797Cellular ComponentLUBAC complexInterproscan
GO:0097039Biological Processprotein linear polyubiquitinationInterproscan

 KEGG pathway
KOEnzymeEnzyme IDpathwaymapIDSource
K11976RNF216, TRIAD3; E3 ubiquitin-protein ligase RNF216EC:2.3.2.31
Ubiquitin systemko04121deepkoala

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