Detailed information of gene21024.t1 in Actinoscyphia liui

Genomic Location: chr6:1663738...1674642
NR annotation: XP_031572119.1, sorting nexin lst-4-like [Actinia tenebrosa]


 Gene Structure
More details in Jbrowse  Sequence
CDS
Transcript
Protein
 Uniprot
Uniprot termDescription
Q8I4E2Sorting nexin lst-4 OS=Caenorhabditis elegans OX=6239 GN=lst-4 PE=1 SV=1
Q96RF0Sorting nexin-18 OS=Homo sapiens OX=9606 GN=SNX18 PE=1 SV=2
Q4VAA7Sorting nexin-33 OS=Mus musculus OX=10090 GN=Snx33 PE=1 SV=1
 Gene family
Gene familySubfamily
Ubiquitin FamilyUBD|Other|SH3

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF00787PXPX domainDomainInterproscan
PF14604SH3_9Variant SH3 domainDomainInterproscan
PF10456BAR_3_WASP_bdgWASP-binding domain of Sorting nexin proteinDomainInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR036871Homologous_superfamilyPX domain superfamilyInterproscan
IPR001683DomainPhox homologyInterproscan
IPR001452DomainSH3 domainInterproscan
IPR019497DomainSorting nexin protein, WASP-binding domainInterproscan
IPR036028Homologous_superfamilySH3-like domain superfamilyInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR45827SORTING NEXINInterproscan

 Gene Ontology
GO termsCategoryDescriptionSource
GO:0035091Molecular Functionphosphatidylinositol bindingInterproscan
GO:0005886Cellular Componentplasma membraneInterproscan
GO:0006897Biological ProcessendocytosisInterproscan
GO:0016197Biological Processendosomal transportInterproscan
GO:0031410Cellular Componentcytoplasmic vesicleInterproscan
GO:0097320Biological Processplasma membrane tubulationInterproscan
GO:0005515Molecular Functionprotein bindingInterproscan

 KEGG pathway
KOEnzymeEnzyme IDpathwaymapIDSource
K17923SNX9_18_33; sorting nexin-9/18/33-Domain-containing proteins not elsewhere classifiedko04990deepkoala

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