Detailed information of gene21200.t1 in Actinoscyphia liui

Genomic Location: chr6:5053912...5061784
NR annotation: XP_020894352.1, NSFL1 cofactor p47 [Exaiptasia diaphana]


 Gene Structure
More details in Jbrowse  Sequence
CDS
Transcript
Protein
 Uniprot
Uniprot termDescription
Q3SZC4NSFL1 cofactor p47 OS=Bos taurus OX=9913 GN=NSFL1C PE=2 SV=1
Q9UNZ2NSFL1 cofactor p47 OS=Homo sapiens OX=9606 GN=NSFL1C PE=1 SV=2
Q5RBG3NSFL1 cofactor p47 OS=Pongo abelii OX=9601 GN=NSFL1C PE=2 SV=1
 Gene family
Gene familySubfamily
Ubiquitin FamilyULD|UFD|UBX

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF14555UBA_4UBA-like domainDomainInterproscan
PF08059SEPSEP domainDomainInterproscan
PF00789UBXUBX domainDomainInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR001012DomainUBX domainInterproscan
IPR036241Homologous_superfamilyNSFL1 cofactor p47, SEP domain superfamilyInterproscan
IPR029071Homologous_superfamilyUbiquitin-like domain superfamilyInterproscan
IPR009060Homologous_superfamilyUBA-like superfamilyInterproscan
IPR012989DomainSEP domainInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR23333UBX DOMAIN CONTAINING PROTEINInterproscan

 Gene Ontology
GO termsCategoryDescriptionSource
GO:0005515Molecular Functionprotein bindingInterproscan
GO:0000045Biological Processautophagosome assemblyInterproscan
GO:0005634Cellular ComponentnucleusInterproscan
GO:0005829Cellular ComponentcytosolInterproscan
GO:0007030Biological ProcessGolgi organizationInterproscan
GO:0031468Biological Processnuclear membrane reassemblyInterproscan
GO:0043130Molecular Functionubiquitin bindingInterproscan
GO:0043161Biological Processproteasome-mediated ubiquitin-dependent protein catabolic processInterproscan
GO:0061025Biological Processmembrane fusionInterproscan

 KEGG pathway
KOEnzymeEnzyme IDpathwaymapIDSource
K14012NSFL1C, UBX1, SHP1; UBX domain-containing protein 1-Membrane traffickingko04131deepkoala

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