Detailed information of gene22991.t1 in Actinoscyphia liui

Genomic Location: chr6:38341524...38362387
NR annotation: XP_020913617.1, WD repeat-containing protein 78 [Exaiptasia diaphana]


 Gene Structure
More details in Jbrowse  Sequence
CDS
Transcript
Protein
 Uniprot
Uniprot termDescription
Q6GPB9Dynein axonemal intermediate chain 4 OS=Xenopus laevis OX=8355 GN=dnai4 PE=2 SV=1
E9PYY5Dynein axonemal intermediate chain 4 OS=Mus musculus OX=10090 GN=Dnai4 PE=1 SV=1
Q4V8G4Dynein axonemal intermediate chain 4 OS=Rattus norvegicus OX=10116 GN=Dnai4 PE=2 SV=1
 Gene family
Gene familySubfamily
Ubiquitin FamilyUBD|Other|Beta-prp
Ubiquitin FamilyE3|E3 adaptor Cullin RING|CDC20
Ubiquitin FamilyE3|E3 adaptor Cullin RING|DWD

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF00400WD40WD domain, G-beta repeatRepeatInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR001680RepeatWD40 repeatInterproscan
IPR036322Homologous_superfamilyWD40-repeat-containing domain superfamilyInterproscan
IPR015943Homologous_superfamilyWD40/YVTN repeat-like-containing domain superfamilyInterproscan
IPR050687FamilyDynein Intermediate ChainInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR12442DYNEIN INTERMEDIATE CHAINInterproscan

 Gene Ontology
GO termsCategoryDescriptionSource
GO:0005515Molecular Functionprotein bindingInterproscan
GO:0003341Biological Processcilium movementInterproscan
GO:0005858Cellular Componentaxonemal dynein complexInterproscan
GO:0007018Biological Processmicrotubule-based movementInterproscan
GO:0045503Molecular Functiondynein light chain bindingInterproscan
GO:0045504Molecular Functiondynein heavy chain bindingInterproscan

 KEGG pathway
KOEnzymeEnzyme IDpathwaymapIDSource
K24723DNAI4, WDR78; dynein axonemal intermediate chain 4-Cytoskeleton proteinsko04812deepkoala

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