Detailed information of gene24143.t3 in Actinoscyphia liui

Genomic Location: chr7:7763517...7780091
NR annotation: XP_020895516.1, PHD finger protein 20 [Exaiptasia diaphana]


 Gene Structure
More details in Jbrowse  Sequence
CDS
Transcript
Protein
 Uniprot
Uniprot termDescription
Q4V9H5PHD finger protein 20-like protein 1 OS=Rattus norvegicus OX=10116 GN=Phf20l1 PE=1 SV=2
A8MW92PHD finger protein 20-like protein 1 OS=Homo sapiens OX=9606 GN=PHF20L1 PE=1 SV=2
Q9BVI0PHD finger protein 20 OS=Homo sapiens OX=9606 GN=PHF20 PE=1 SV=2
 Gene family
Gene familySubfamily
Ubiquitin FamilyE3|E3 activity RING|PHD

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF11717Tudor-knotRNA binding activity-knot of a chromodomain FamilyInterproscan
PF20826PHD_5PhD finger domainDomainInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR013083Homologous_superfamilyZinc finger, RING/FYVE/PHD-typeInterproscan
IPR002999DomainTudor domainInterproscan
IPR013087DomainZinc finger C2H2-typeInterproscan
IPR019786Conserved_siteZinc finger, PHD-type, conserved siteInterproscan
IPR011011Homologous_superfamilyZinc finger, FYVE/PHD-typeInterproscan
IPR025995DomainRNA binding activity-knot of a chromodomainInterproscan
IPR043449FamilyPHD finger protein 20-likeInterproscan
IPR016197Homologous_superfamilyChromo-like domain superfamilyInterproscan
IPR001965DomainZinc finger, PHD-typeInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR15856PHD FINGER PROTEIN 20-RELATEDInterproscan

 Gene Ontology
GO termsCategoryDescriptionSource
GO:0006357Biological Processregulation of transcription by RNA polymerase IIInterproscan
GO:0016573Biological Processobsolete histone acetylationInterproscan
GO:0044545Cellular ComponentNSL complexInterproscan

TOP