Detailed information of gene24846.t1 in Actinoscyphia liui

Genomic Location: chr7:17722792...17758139
NR annotation: XP_028516543.1, protein polybromo-1 [Exaiptasia diaphana]


 Gene Structure
More details in Jbrowse  Sequence
CDS
Transcript
Protein
 Uniprot
Uniprot termDescription
Q90941Protein polybromo-1 OS=Gallus gallus OX=9031 GN=PBRM1 PE=1 SV=1
Q86U86Protein polybromo-1 OS=Homo sapiens OX=9606 GN=PBRM1 PE=1 SV=1
Q8BSQ9Protein polybromo-1 OS=Mus musculus OX=10090 GN=Pbrm1 PE=1 SV=4
 Gene family
Gene familySubfamily
Transcription Factors FamilyHMG

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF00439BromodomainBromodomainDomainInterproscan
PF01426BAHBAH domainDomainInterproscan
PF00505HMG_boxHMG (high mobility group) boxDomainInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR036910Homologous_superfamilyHigh mobility group box domain superfamilyInterproscan
IPR036427Homologous_superfamilyBromodomain-like superfamilyInterproscan
IPR001487DomainBromodomainInterproscan
IPR037382FamilyRemodelling complex subunit Rsc/polybromoInterproscan
IPR001025DomainBromo adjacent homology (BAH) domainInterproscan
IPR043151Homologous_superfamilyBromo adjacent homology (BAH) domain superfamilyInterproscan
IPR009071DomainHigh mobility group box domainInterproscan
IPR037968DomainProtein polybromo-1, Bromodomain 5Interproscan
IPR013087DomainZinc finger C2H2-typeInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR16062SWI/SNF-RELATEDInterproscan

 Gene Ontology
GO termsCategoryDescriptionSource
GO:0005515Molecular Functionprotein bindingInterproscan
GO:0003682Molecular Functionchromatin bindingInterproscan
GO:0006338Biological Processchromatin remodelingInterproscan
GO:0006368Biological Processtranscription elongation by RNA polymerase IIInterproscan
GO:0016586Cellular ComponentRSC-type complexInterproscan
GO:0043044Biological Processchromatin remodelingInterproscan

 KEGG pathway
KOEnzymeEnzyme IDpathwaymapIDSource
K11757PBRM1, PB1; protein polybromo-1-Chromosome and associated proteinsko03036deepkoala

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