Detailed information of gene25949.t3 in Actinoscyphia liui

Genomic Location: chr7:38645430...38709090
NR annotation: XP_031552973.1, E3 ubiquitin-protein ligase UBR5-like isoform X3 [Actinia tenebrosa]


 Gene Structure
More details in Jbrowse  Sequence
CDS
Transcript
Protein
 Uniprot
Uniprot termDescription
Q80TP3E3 ubiquitin-protein ligase UBR5 OS=Mus musculus OX=10090 GN=Ubr5 PE=1 SV=2
O95071E3 ubiquitin-protein ligase UBR5 OS=Homo sapiens OX=9606 GN=UBR5 PE=1 SV=2
Q62671E3 ubiquitin-protein ligase UBR5 OS=Rattus norvegicus OX=10116 GN=Ubr5 PE=1 SV=3
 Gene family
Gene familySubfamily
Ubiquitin FamilyE3|E3 activity|HECT
Ubiquitin FamilyE3|E3 activity|UBR-box

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF11547E3_UbLigase_EDDE3 ubiquitin ligase EDDDomainInterproscan
PF00632HECTHECT-domain (ubiquitin-transferase)DomainInterproscan
PF00658PABPPoly-adenylate binding protein, unique domainFamilyInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR024725DomainE3 ubiquitin-protein ligase UBR5, ubiquitin-associated domainInterproscan
IPR035983Homologous_superfamilyHECT, E3 ligase catalytic domainInterproscan
IPR009091Homologous_superfamilyRegulator of chromosome condensation 1/beta-lactamase-inhibitor protein IIInterproscan
IPR000569DomainHECT domainInterproscan
IPR036053Homologous_superfamilyPABC (PABP) domainInterproscan
IPR003126DomainZinc finger, UBR-typeInterproscan
IPR047503DomainE3 ubiquitin-protein ligase UBR5, UBR-boxInterproscan
IPR002004DomainPolyadenylate-binding protein/Hyperplastic disc proteinInterproscan
IPR015940DomainUbiquitin-associated domainInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR46276E3 UBIQUITIN-PROTEIN LIGASE UBR5Interproscan

 Gene Ontology
GO termsCategoryDescriptionSource
GO:0043130Molecular Functionubiquitin bindingInterproscan
GO:0004842Molecular Functionubiquitin-protein transferase activityInterproscan
GO:0000209Biological Processprotein polyubiquitinationInterproscan
GO:0005634Cellular ComponentnucleusInterproscan
GO:0005737Cellular ComponentcytoplasmInterproscan
GO:0034450Molecular Functionubiquitin-ubiquitin ligase activityInterproscan
GO:0090263Biological Processpositive regulation of canonical Wnt signaling pathwayInterproscan
GO:0003723Molecular FunctionRNA bindingInterproscan
GO:0008270Molecular Functionzinc ion bindingInterproscan

 KEGG pathway
KOEnzymeEnzyme IDpathwaymapIDSource
K10593EDD1, UBR5; E3 ubiquitin-protein ligase EDD1EC:2.3.2.26
Ubiquitin systemko04121deepkoala

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