Detailed information of gene27104.t2 in Actinoscyphia liui

Genomic Location: chr8:17850060...17886386
NR annotation: XP_020916928.1, ubiquitin carboxyl-terminal hydrolase 48 [Exaiptasia diaphana]


 Gene Structure
More details in Jbrowse  Sequence
CDS
Transcript
Protein
 Uniprot
Uniprot termDescription
Q5ZM45Ubiquitin carboxyl-terminal hydrolase 48 OS=Gallus gallus OX=9031 GN=USP48 PE=2 SV=1
A0A0R4IB93Ubiquitin carboxyl-terminal hydrolase 48 OS=Danio rerio OX=7955 GN=usp48 PE=3 SV=1
Q3V0C5Ubiquitin carboxyl-terminal hydrolase 48 OS=Mus musculus OX=10090 GN=Usp48 PE=1 SV=2
 Gene family
Gene familySubfamily
Ubiquitin FamilyULD|UFD/UBQ|UBQ_PIM
Ubiquitin FamilyDUB|USP|USP

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF06337DUSPDUSP domainDomainInterproscan
PF00443UCHUbiquitin carboxyl-terminal hydrolaseFamilyInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR018200Conserved_siteUbiquitin specific protease, conserved siteInterproscan
IPR038765Homologous_superfamilyPapain-like cysteine peptidase superfamilyInterproscan
IPR035927Homologous_superfamilyDUSP-like superfamilyInterproscan
IPR044743DomainUbiquitin-specific-processing protease 48, Ubl domainInterproscan
IPR006615DomainPeptidase C19, ubiquitin-specific peptidase, DUSP domainInterproscan
IPR029071Homologous_superfamilyUbiquitin-like domain superfamilyInterproscan
IPR050164FamilyUbiquitin carboxyl-terminal hydrolasesInterproscan
IPR001394DomainPeptidase C19, ubiquitin carboxyl-terminal hydrolaseInterproscan
IPR028889DomainUbiquitin specific protease domainInterproscan
IPR033841DomainUbiquitin-specific peptidase 48Interproscan
IPR000626DomainUbiquitin-like domainInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR24006UBIQUITIN CARBOXYL-TERMINAL HYDROLASEInterproscan

 Gene Ontology
GO termsCategoryDescriptionSource
GO:0004843Molecular Functioncysteine-type deubiquitinase activityInterproscan
GO:0004197Molecular Functioncysteine-type endopeptidase activityInterproscan
GO:0016579Biological Processprotein deubiquitinationInterproscan
GO:0005634Cellular ComponentnucleusInterproscan
GO:0005829Cellular ComponentcytosolInterproscan
GO:0005515Molecular Functionprotein bindingInterproscan

 KEGG pathway
KOEnzymeEnzyme IDpathwaymapIDSource
K11858USP48; ubiquitin carboxyl-terminal hydrolase 48EC:3.4.19.12
Ubiquitin systemko04121deepkoala

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