Detailed information of gene27718.t1 in Actinoscyphia liui

Genomic Location: chr9:2715797...2716849
NR annotation: XP_020907804.1, transcription factor sox-2 [Exaiptasia diaphana]


 Gene Structure
More details in Jbrowse  Sequence
CDS
Transcript
Protein
 Uniprot
Uniprot termDescription
P40646Transcription factor SOX-7 OS=Mus musculus OX=10090 GN=Sox7 PE=1 SV=2
Q3KQ35Transcription factor Sox-17-alpha-A OS=Xenopus laevis OX=8355 GN=sox17a-a PE=1 SV=1
P35713Transcription factor SOX-18 OS=Homo sapiens OX=9606 GN=SOX18 PE=1 SV=2
 Gene family
Gene familySubfamily
Transcription Factors FamilyHMG

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF00505HMG_boxHMG (high mobility group) boxDomainInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR050140FamilySRY-related HMG-box transcription factorsInterproscan
IPR009071DomainHigh mobility group box domainInterproscan
IPR036910Homologous_superfamilyHigh mobility group box domain superfamilyInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR10270SOX TRANSCRIPTION FACTORInterproscan

 Gene Ontology
GO termsCategoryDescriptionSource
GO:0000978Molecular FunctionRNA polymerase II cis-regulatory region sequence-specific DNA bindingInterproscan
GO:0000981Molecular FunctionDNA-binding transcription factor activity, RNA polymerase II-specificInterproscan
GO:0006355Biological Processregulation of DNA-templated transcriptionInterproscan
GO:0009653Biological Processanatomical structure morphogenesisInterproscan
GO:0030154Biological Processcell differentiationInterproscan

 KEGG pathway
KOEnzymeEnzyme IDpathwaymapIDSource
K09270SOX7S; transcription factor SOX7/8/10/18 (SOX group E/F)-Transcription factorsko03000deepkoala

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