Detailed information of gene27738.t1 in Actinoscyphia liui

Genomic Location: chr9:2907078...2919571
NR annotation: XP_031557007.1, periodic tryptophan protein 1 homolog [Actinia tenebrosa]


 Gene Structure
More details in Jbrowse  Sequence
CDS
Transcript
Protein
 Uniprot
Uniprot termDescription
Q99LL5Periodic tryptophan protein 1 homolog OS=Mus musculus OX=10090 GN=Pwp1 PE=1 SV=1
Q13610Periodic tryptophan protein 1 homolog OS=Homo sapiens OX=9606 GN=PWP1 PE=1 SV=1
Q2HJ56Periodic tryptophan protein 1 homolog OS=Bos taurus OX=9913 GN=PWP1 PE=2 SV=1
 Gene family
Gene familySubfamily
Ubiquitin FamilyE3|E3 adaptor Cullin RING|CDC20
Ubiquitin FamilyE3|E3 adaptor Cullin RING|DWD

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF00400WD40WD domain, G-beta repeatRepeatInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR015943Homologous_superfamilyWD40/YVTN repeat-like-containing domain superfamilyInterproscan
IPR019775Conserved_siteWD40 repeat, conserved siteInterproscan
IPR036322Homologous_superfamilyWD40-repeat-containing domain superfamilyInterproscan
IPR020472RepeatG-protein beta WD-40 repeatInterproscan
IPR001680RepeatWD40 repeatInterproscan
IPR044285FamilyPeriodic tryptophan protein 1Interproscan

 PANTHER
PANTHER termDescriptionSource
PTHR14091PERIODIC TRYPTOPHAN PROTEIN 1Interproscan

 Gene Ontology
GO termsCategoryDescriptionSource
GO:0005515Molecular Functionprotein bindingInterproscan
GO:0005634Cellular ComponentnucleusInterproscan
GO:0006364Biological ProcessrRNA processingInterproscan

 KEGG pathway
KOEnzymeEnzyme IDpathwaymapIDSource
K14791PWP1; periodic tryptophan protein 1-Ribosome biogenesisko03009deepkoala

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